Functional clusters
Information
- Type Gene Ontology
- Description delta 3-trans-hexadecenoic acid phosphatidylglycerol desaturase activity
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Aethionema arabicum | LG-5 | 3 | CH_aar_196 | 2 | 3 | 0.000273685 |
| Acer truncatum | chr2 | 3 | CH_acertr_261 | 3 | 29 | 0.0000272156 |
| Aquilegia oxysepala | CHR01 | 3 | CH_aox_193 | 2 | 2 | 0.0000801989 |
| Corylus avellana | 6 | 3 | CH_cav_338 | 2 | 2 | 0.000230008 |
| Chenopodium quinoa | C_Quinoa_Scaffold_1529 | 3 | CH_cqu_389 | 2 | 2 | 0.000142146 |
| Fragaria x ananassa | Fvb3-2 | 3 | CH_fan_415 | 2 | 2 | 0.000185036 |
| Fragaria x ananassa | Fvb3-4 | 3 | CH_fan_506 | 2 | 3 | 0.000555093 |
| Fragaria vesca | Fvb3 | 3 | CH_fve_284 | 2 | 3 | 0.000176725 |
| Lactuca sativa | Lsat_1_v8_lg_5 | 3 | CH_lsa_272 | 3 | 24 | 0.00000801708 |
| Prunus persica | Pp04 | 3 | CH_ppe_332 | 2 | 2 | 0.0000745962 |
| Quercus lobata | 8 | 3 | CH_qlo_324 | 4 | 16 | 0.00000000375519 |
| Simmondsia chinensis | GWHAASQ00000003 | 3 | CH_sci_36 | 3 | 3 | 0.0000000108744 |
| Zea mays | 10 | 3 | CH_zma_258 | 2 | 4 | 0.000306772 |
| Aethionema arabicum | LG-5 | 4 | CH_aar_196 | 2 | 3 | 0.000273685 |
| Acer truncatum | chr2 | 4 | CH_acertr_261 | 3 | 29 | 0.0000272156 |
| Aquilegia oxysepala | CHR01 | 4 | CH_aox_193 | 2 | 2 | 0.0000801989 |
| Corylus avellana | 6 | 4 | CH_cav_338 | 2 | 2 | 0.000230008 |
| Chenopodium quinoa | C_Quinoa_Scaffold_1529 | 4 | CH_cqu_389 | 2 | 2 | 0.000142146 |
| Fragaria x ananassa | Fvb3-2 | 4 | CH_fan_415 | 2 | 2 | 0.000185036 |
| Fragaria x ananassa | Fvb3-4 | 4 | CH_fan_506 | 2 | 3 | 0.000555093 |
| Fragaria vesca | Fvb3 | 4 | CH_fve_284 | 2 | 3 | 0.000176725 |
| Lactuca sativa | Lsat_1_v8_lg_5 | 4 | CH_lsa_272 | 3 | 24 | 0.00000801708 |
| Prunus persica | Pp04 | 4 | CH_ppe_332 | 2 | 2 | 0.0000745962 |
| Quercus lobata | 8 | 4 | CH_qlo_324 | 4 | 16 | 0.00000000375519 |
| Simmondsia chinensis | GWHAASQ00000003 | 4 | CH_sci_36 | 3 | 3 | 0.0000000108744 |
| Zea mays | 10 | 4 | CH_zma_258 | 2 | 4 | 0.000306772 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |