Functional clusters

Information

  • Type Gene Ontology
  • Description modulation by host of symbiont process

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Actinidia chinensis Lachesis_group0 3 CH_ach_220 2 3 0.000488869
Aquilegia oxysepala CHR05 3 CH_aox_46 4 6 0.0000000048729
Aquilegia oxysepala CHR02 3 CH_aox_56 4 7 0.0000000113674
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.18 3 CH_arhy_256 3 4 0.000000053777
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.08 3 CH_arhy_586 2 2 0.000299383
Amborella trichopoda AmTr_v1.0_scaffold00002 3 CH_atr_118 3 3 0.000000530131
Amborella trichopoda AmTr_v1.0_scaffold00005 3 CH_atr_30 5 5 0.0000000000000167312
Camellia sinensis var. sinensis Chr6 3 CH_camsi_49 5 6 0.00000000000000119383
Capsicum annuum PGAv.1.6.scaffold631 3 CH_can_73 4 4 0.00000000000169153
Citrus clementina scaffold_3 3 CH_ccl_430 2 2 0.000820311
Cucumis melo chr11 3 CH_cme_84 3 3 0.0000000267031
Cucumis sativus L. chr6 3 CH_csa_53 4 4 0.0000000000261789
Davidia involucrata GWHABJS00000016 3 CH_din_57 4 4 0.0000000000262717
Erigeron canadensis Conyza_canadensis_scaffold:4 3 CH_eca_14 6 13 5.89822e-16
Eucalyptus grandis Chr02 3 CH_egr_298 4 4 0.000000000126316
Erythranthe guttata scaffold_2 3 CH_egut_185 3 5 0.00000079518
Gossypium hirsutum D05 3 CH_ghi_514 2 3 0.000240309
Glycine max Gm03 3 CH_gma_151 4 21 0.0000000686358
Gossypium raimondii Chr09 3 CH_gra_266 2 2 0.000160832
Helianthus annuus HanXRQChr16 3 CH_han_13 9 11 3.58159e-26
Helianthus annuus HanXRQChr13 3 CH_han_23 8 10 1.37855e-22
Hydrangea macrophylla Hma1.2p1_0297F.1 3 CH_hma_100 3 4 0.00000414544
Hydrangea macrophylla Hma1.2p1_0033F.1 3 CH_hma_20 5 8 0.00000000000358074
Lonicera japonica GWHAAZE00000009 3 CH_lonja_221 3 4 0.0000000860741
Lactuca sativa Lsat_1_v8_lg_4 3 CH_lsa_100 4 4 0.0000000000855619
Lactuca sativa Lsat_1_v8_lg_3 3 CH_lsa_475 3 22 0.000730157
Magnolia biondii Chr18 3 CH_mbi_116 4 9 0.000000000649347
Manihot esculenta Chromosome05 3 CH_mes_112 4 5 0.000000000119534
Manihot esculenta Chromosome11 3 CH_mes_194 3 4 0.000000782956
Medicago truncatula chr2 3 CH_mtr_218 4 8 0.00000000480415
Olea europaea chr3 3 CH_oeu_13 5 11 0.000000000000168762
Petunia axillaris Peaxi162Scf00056 3 CH_pax_303 2 2 0.000422134
Petunia axillaris Peaxi162Scf00115 3 CH_pax_304 2 2 0.000422134
Prunus persica Pp06 3 CH_ppe_253 3 6 0.00000584043
Pisum sativum chr3LG5 3 CH_psa_344 2 3 0.000469451
Papaver somniferum NC_039364.1 3 CH_pso_293 3 6 0.000000532885
Quercus lobata 1 3 CH_qlo_730 2 2 0.0000516289
Rhododendron simsii chr13 3 CH_rsi_80 5 12 0.000000000000103
Salvia bowleyana GWHASIU00000006 3 CH_sbo_6 11 11 1.77993e-38
Simmondsia chinensis GWHAASQ00000001 3 CH_sci_222 2 2 0.000255428
Sechium edule LG05 3 CH_sed_249 2 2 0.000428052
Sequoiadendron giganteum chr3 3 CH_sgi_750 3 8 0.0000019929
Solanum lycopersicum SL4.0ch11 3 CH_sly_442 2 2 0.000176082
Solanum tuberosum ST4.03ch11 3 CH_stu_28 6 6 2.227e-19
Trochodendron aralioides group1 3 CH_tar_187 3 7 0.0000018918
Theobroma cacao Chromosome_9 3 CH_tca_336 2 2 0.000219716
Trifolium pratense Tp57577_TGAC_v2_LG7 3 CH_tpr_107 3 6 0.0000006875
Vaccinium macrocarpon chr9_Vaccinium_macrocarpon_Stevens_v1 3 CH_vma_114 3 4 0.000000207229
Vigna mungo CM024071.1 3 CH_vmu_68 3 3 0.0000000250507
Vanilla planifolia CM028161.1 3 CH_vpl_304 2 4 0.000443295
Vitis vinifera chr15 3 CH_vvi_84 4 4 0.0000000000462124
Actinidia chinensis Lachesis_group0 4 CH_ach_220 2 3 0.000488869
Aquilegia oxysepala CHR05 4 CH_aox_46 4 6 0.0000000048729
Aquilegia oxysepala CHR02 4 CH_aox_56 4 7 0.0000000113674
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.18 4 CH_arhy_256 3 4 0.000000053777
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.08 4 CH_arhy_586 2 2 0.000299383
Amborella trichopoda AmTr_v1.0_scaffold00002 4 CH_atr_118 3 3 0.000000530131
Amborella trichopoda AmTr_v1.0_scaffold00005 4 CH_atr_30 5 5 0.0000000000000167312
Camellia sinensis var. sinensis Chr6 4 CH_camsi_49 5 6 0.00000000000000119383
Capsicum annuum PGAv.1.6.scaffold631 4 CH_can_73 4 4 0.00000000000169153
Citrus clementina scaffold_3 4 CH_ccl_430 2 2 0.000820311
Cucumis melo chr11 4 CH_cme_84 3 3 0.0000000267031
Cucumis sativus L. chr6 4 CH_csa_53 4 4 0.0000000000261789
Davidia involucrata GWHABJS00000016 4 CH_din_57 4 4 0.0000000000262717
Erigeron canadensis Conyza_canadensis_scaffold:4 4 CH_eca_14 6 13 5.89822e-16
Eucalyptus grandis Chr02 4 CH_egr_298 4 4 0.000000000126316
Erythranthe guttata scaffold_2 4 CH_egut_185 3 5 0.00000079518
Gossypium hirsutum D05 4 CH_ghi_514 2 3 0.000240309
Glycine max Gm03 4 CH_gma_151 4 21 0.0000000686358
Gossypium raimondii Chr09 4 CH_gra_266 2 2 0.000160832
Helianthus annuus HanXRQChr16 4 CH_han_13 9 11 3.58159e-26
Helianthus annuus HanXRQChr13 4 CH_han_23 8 10 1.37855e-22
Hydrangea macrophylla Hma1.2p1_0297F.1 4 CH_hma_100 3 4 0.00000414544
Hydrangea macrophylla Hma1.2p1_0033F.1 4 CH_hma_20 5 8 0.00000000000358074
Lonicera japonica GWHAAZE00000009 4 CH_lonja_221 3 4 0.0000000860741
Lactuca sativa Lsat_1_v8_lg_4 4 CH_lsa_100 4 4 0.0000000000855619
Lactuca sativa Lsat_1_v8_lg_3 4 CH_lsa_475 3 22 0.000730157
Magnolia biondii Chr18 4 CH_mbi_116 4 9 0.000000000649347
Manihot esculenta Chromosome05 4 CH_mes_112 4 5 0.000000000119534
Manihot esculenta Chromosome11 4 CH_mes_194 3 4 0.000000782956
Medicago truncatula chr2 4 CH_mtr_218 4 8 0.00000000480415
Olea europaea chr3 4 CH_oeu_13 5 11 0.000000000000168762
Petunia axillaris Peaxi162Scf00056 4 CH_pax_303 2 2 0.000422134
Petunia axillaris Peaxi162Scf00115 4 CH_pax_304 2 2 0.000422134
Prunus persica Pp06 4 CH_ppe_253 3 6 0.00000584043
Pisum sativum chr3LG5 4 CH_psa_344 2 3 0.000469451
Papaver somniferum NC_039364.1 4 CH_pso_293 3 6 0.000000532885
Quercus lobata 1 4 CH_qlo_730 2 2 0.0000516289
Rhododendron simsii chr13 4 CH_rsi_80 5 12 0.000000000000103
Salvia bowleyana GWHASIU00000006 4 CH_sbo_6 11 11 1.77993e-38
Simmondsia chinensis GWHAASQ00000001 4 CH_sci_222 2 2 0.000255428
Sechium edule LG05 4 CH_sed_249 2 2 0.000428052
Sequoiadendron giganteum chr3 4 CH_sgi_750 3 8 0.0000019929
Solanum lycopersicum SL4.0ch11 4 CH_sly_442 2 2 0.000176082
Solanum tuberosum ST4.03ch11 4 CH_stu_28 6 6 2.227e-19
Trochodendron aralioides group1 4 CH_tar_187 3 7 0.0000018918
Theobroma cacao Chromosome_9 4 CH_tca_336 2 2 0.000219716
Trifolium pratense Tp57577_TGAC_v2_LG7 4 CH_tpr_107 3 6 0.0000006875
Vaccinium macrocarpon chr9_Vaccinium_macrocarpon_Stevens_v1 4 CH_vma_114 3 4 0.000000207229
Vigna mungo CM024071.1 4 CH_vmu_68 3 3 0.0000000250507
Vanilla planifolia CM028161.1 4 CH_vpl_304 2 4 0.000443295
Vitis vinifera chr15 4 CH_vvi_84 4 4 0.0000000000462124

Available child term results

Ontology identifier Description Number of clusters
GO:0044830 modulation by host of viral RNA genome replication 14

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001