Functional clusters

Information

  • Type Gene Ontology
  • Description 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Cicer arietinum L. Ca_LG6_v3 3 CH_car_143 2 3 0.000233481
Citrus clementina scaffold_8 3 CH_ccl_89 4 7 0.0000000000579595
Daucus carota DCARv2_Chr6 3 CH_dca_302 2 2 0.000191333
Erythranthe guttata scaffold_2 3 CH_egut_323 2 3 0.000218436
Fragaria x ananassa Fvb2-2 3 CH_fan_460 2 2 0.000388576
Fragaria vesca Fvb2 3 CH_fve_326 2 4 0.00035344
Helianthus annuus HanXRQChr16 3 CH_han_639 2 2 0.000386429
Medicago truncatula chr4 3 CH_mtr_730 2 4 0.000739503
Oryza sativa ssp. japonica chr03 3 CH_osa_286 2 2 0.0000528123
Prunus persica Pp08 3 CH_ppe_324 2 2 0.0000745962
Pisum sativum chr7LG7 3 CH_psa_309 2 4 0.000312965
Quercus lobata 11 3 CH_qlo_95 8 67 2.00696e-18
Rosa chinensis RcHm_v2.0_Chr6 3 CH_rch_494 2 2 0.0000398653
Rhododendron simsii chr11 3 CH_rsi_453 2 2 0.000387184
Salvia bowleyana GWHASIU00000002 3 CH_sbo_191 3 8 0.00000017387
Sequoiadendron giganteum chr6 3 CH_sgi_1111 2 2 0.000146145
Vaccinium macrocarpon chr1_Vaccinium_macrocarpon_Stevens_v1 3 CH_vma_227 2 2 0.0000929238
Cicer arietinum L. Ca_LG6_v3 4 CH_car_143 2 3 0.000233481
Citrus clementina scaffold_8 4 CH_ccl_89 4 7 0.0000000000579595
Daucus carota DCARv2_Chr6 4 CH_dca_302 2 2 0.000191333
Erythranthe guttata scaffold_2 4 CH_egut_323 2 3 0.000218436
Fragaria x ananassa Fvb2-2 4 CH_fan_460 2 2 0.000388576
Fragaria vesca Fvb2 4 CH_fve_326 2 4 0.00035344
Helianthus annuus HanXRQChr16 4 CH_han_639 2 2 0.000386429
Medicago truncatula chr4 4 CH_mtr_730 2 4 0.000739503
Oryza sativa ssp. japonica chr03 4 CH_osa_286 2 2 0.0000528123
Prunus persica Pp08 4 CH_ppe_324 2 2 0.0000745962
Pisum sativum chr7LG7 4 CH_psa_309 2 4 0.000312965
Quercus lobata 11 4 CH_qlo_95 8 67 2.00696e-18
Rosa chinensis RcHm_v2.0_Chr6 4 CH_rch_494 2 2 0.0000398653
Rhododendron simsii chr11 4 CH_rsi_453 2 2 0.000387184
Salvia bowleyana GWHASIU00000002 4 CH_sbo_191 3 8 0.00000017387
Sequoiadendron giganteum chr6 4 CH_sgi_1111 2 2 0.000146145
Vaccinium macrocarpon chr1_Vaccinium_macrocarpon_Stevens_v1 4 CH_vma_227 2 2 0.0000929238

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001