Functional clusters
Information
- Type Gene Ontology
- Description protein complex oligomerization
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Camellia sinensis var. sinensis | Chr11 | 3 | CH_camsi_68 | 8 | 16 | 0.000000000000132216 |
| Carya illinoinensis | Chr13 | 3 | CH_cil_78 | 8 | 14 | 0.000000000000174233 |
| Lonicera japonica | GWHAAZE00000002 | 3 | CH_lonja_466 | 3 | 3 | 0.000224149 |
| Oryza sativa ssp. japonica | chr01 | 3 | CH_osa_106 | 5 | 6 | 0.00000000603343 |
| Punica granatum | NC_045132.1 | 3 | CH_pgr_48 | 7 | 9 | 0.000000000000821297 |
| Prunus persica | Pp06 | 3 | CH_ppe_107 | 6 | 7 | 0.000000000018188 |
| Papaver somniferum | NW_020635485.1 | 3 | CH_pso_621 | 3 | 3 | 0.00047252 |
| Rhododendron simsii | chr01 | 3 | CH_rsi_128 | 7 | 18 | 0.000000000191544 |
| Rhododendron simsii | chr01 | 3 | CH_rsi_320 | 4 | 7 | 0.0000242698 |
| Solanum pennellii | Spenn-ch12 | 3 | CH_spe_132 | 8 | 79 | 0.0000000539955 |
| Solanum pennellii | Spenn-ch06 | 3 | CH_spe_181 | 5 | 14 | 0.0000011472 |
| Solanum tuberosum | ST4.03ch09 | 3 | CH_stu_119 | 6 | 7 | 0.0000000000345992 |
| Solanum tuberosum | ST4.03ch06 | 3 | CH_stu_171 | 5 | 6 | 0.0000000136159 |
| Solanum tuberosum | ST4.03ch12 | 3 | CH_stu_432 | 4 | 9 | 0.000128832 |
| Vaccinium macrocarpon | chr7_Vaccinium_macrocarpon_Stevens_v1 | 3 | CH_vma_57 | 6 | 8 | 0.000000000176006 |
| Camellia sinensis var. sinensis | Chr11 | 4 | CH_camsi_68 | 8 | 16 | 0.000000000000132216 |
| Carya illinoinensis | Chr13 | 4 | CH_cil_78 | 8 | 14 | 0.000000000000174233 |
| Lonicera japonica | GWHAAZE00000002 | 4 | CH_lonja_466 | 3 | 3 | 0.000224149 |
| Oryza sativa ssp. japonica | chr01 | 4 | CH_osa_106 | 5 | 6 | 0.00000000603343 |
| Punica granatum | NC_045132.1 | 4 | CH_pgr_48 | 7 | 9 | 0.000000000000821297 |
| Prunus persica | Pp06 | 4 | CH_ppe_107 | 6 | 7 | 0.000000000018188 |
| Papaver somniferum | NW_020635485.1 | 4 | CH_pso_621 | 3 | 3 | 0.00047252 |
| Rhododendron simsii | chr01 | 4 | CH_rsi_128 | 7 | 18 | 0.000000000191544 |
| Rhododendron simsii | chr01 | 4 | CH_rsi_320 | 4 | 7 | 0.0000242698 |
| Solanum pennellii | Spenn-ch12 | 4 | CH_spe_132 | 8 | 79 | 0.0000000539955 |
| Solanum pennellii | Spenn-ch06 | 4 | CH_spe_181 | 5 | 14 | 0.0000011472 |
| Solanum tuberosum | ST4.03ch09 | 4 | CH_stu_119 | 6 | 7 | 0.0000000000345992 |
| Solanum tuberosum | ST4.03ch06 | 4 | CH_stu_171 | 5 | 6 | 0.0000000136159 |
| Solanum tuberosum | ST4.03ch12 | 4 | CH_stu_432 | 4 | 9 | 0.000128832 |
| Vaccinium macrocarpon | chr7_Vaccinium_macrocarpon_Stevens_v1 | 4 | CH_vma_57 | 6 | 8 | 0.000000000176006 |
Available child term results
| Ontology identifier | Description | Number of clusters |
|---|---|---|
| GO:0034214 | protein hexamerization | 4 |
| GO:0051260 | protein homooligomerization | 12 |
| GO:0051290 | protein heterotetramerization | 16 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |