Functional clusters

Information

  • Type Gene Ontology
  • Description regulation of cellular component organization

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arabidopsis thaliana Chr1 3 CH_ath_372 4 4 0.000045383
Sequoiadendron giganteum chr3 3 CH_sgi_1031 8 58 0.0000717271
Zea mays 5 3 CH_zma_323 4 4 0.000725707
Arabidopsis thaliana Chr1 4 CH_ath_372 4 4 0.000045383
Sequoiadendron giganteum chr3 4 CH_sgi_1031 8 58 0.0000717271
Zea mays 5 4 CH_zma_323 4 4 0.000725707

Available child term results

Ontology identifier Description Number of clusters
GO:0001558 regulation of cell growth 6
GO:0007094 mitotic spindle assembly checkpoint signaling 8
GO:0010606 positive regulation of cytoplasmic mRNA processing body assembly 16
GO:0010845 positive regulation of reciprocal meiotic recombination 2
GO:0010964 regulation of heterochromatin assembly by small RNA 4
GO:0010968 regulation of microtubule nucleation 20
GO:0030071 regulation of mitotic metaphase/anaphase transition 20
GO:0030833 regulation of actin filament polymerization 10
GO:0031116 positive regulation of microtubule polymerization 4
GO:0031117 positive regulation of microtubule depolymerization 10
GO:0031935 regulation of chromatin silencing 8
GO:0031937 positive regulation of chromatin silencing 14
GO:0032212 positive regulation of telomere maintenance via telomerase 2
GO:0032889 regulation of vacuole fusion, non-autophagic 2
GO:0032955 regulation of division septum assembly 24
GO:0033043 regulation of organelle organization 2
GO:0033184 positive regulation of histone ubiquitination 4
GO:0033316 meiotic spindle assembly checkpoint signaling 2
GO:0034314 Arp2/3 complex-mediated actin nucleation 12
GO:0035065 regulation of histone acetylation 6
GO:0040020 regulation of meiotic nuclear division 2
GO:0043244 regulation of protein-containing complex disassembly 2
GO:0043254 regulation of protein-containing complex assembly 2
GO:0045010 actin nucleation 2
GO:0045839 negative regulation of mitotic nuclear division 4
GO:0045841 negative regulation of mitotic metaphase/anaphase transition 2
GO:0045876 positive regulation of sister chromatid cohesion 10
GO:0045905 positive regulation of translational termination 2
GO:0051127 positive regulation of actin nucleation 2
GO:0051510 regulation of unidimensional cell growth 2
GO:0051511 negative regulation of unidimensional cell growth 8
GO:0051512 positive regulation of unidimensional cell growth 2
GO:0051513 regulation of monopolar cell growth 12
GO:0051571 positive regulation of histone H3-K4 methylation 8
GO:0051572 negative regulation of histone H3-K4 methylation 2
GO:0051573 negative regulation of histone H3-K9 methylation 2
GO:0051783 regulation of nuclear division 2
GO:0060567 negative regulation of DNA-templated transcription, termination 2
GO:0061866 negative regulation of histone H3-S10 phosphorylation 2
GO:0090063 positive regulation of microtubule nucleation 4
GO:0090173 regulation of synaptonemal complex assembly 6
GO:0090241 negative regulation of histone H4 acetylation 2
GO:0090266 regulation of mitotic cell cycle spindle assembly checkpoint 2
GO:0090309 positive regulation of DNA methylation-dependent heterochromatin assembly 2
GO:1900064 positive regulation of peroxisome organization 2
GO:1900109 regulation of histone H3-K9 dimethylation 4
GO:1900186 negative regulation of clathrin-dependent endocytosis 8
GO:1901651 regulation of mitotic chromosome decondensation 8
GO:1901673 regulation of mitotic spindle assembly 12
GO:1902464 regulation of histone H3-K27 trimethylation 8
GO:1902466 positive regulation of histone H3-K27 trimethylation 2
GO:1902892 positive regulation of root hair elongation 2
GO:1903099 positive regulation of CENP-A containing nucleosome assembly 6
GO:1903527 positive regulation of membrane tubulation 2
GO:1905435 regulation of histone H3-K4 trimethylation 4
GO:1905775 negative regulation of DNA helicase activity 6
GO:2000369 regulation of clathrin-dependent endocytosis 2
GO:2000617 positive regulation of histone H3-K9 acetylation 2
GO:2000694 regulation of phragmoplast microtubule organization 2
GO:2000711 positive regulation of maintenance of meiotic sister chromatid cohesion, centromeric 2
GO:2000786 positive regulation of autophagosome assembly 2
GO:2001253 regulation of histone H3-K36 trimethylation 2

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001