Functional clusters
Information
- Type Gene Ontology
- Description unfolded protein binding
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Amborella trichopoda | AmTr_v1.0_scaffold00146 | 3 | CH_atr_112 | 4 | 4 | 0.000000346415 |
| Camellia sinensis var. sinensis | Chr3 | 3 | CH_camsi_476 | 5 | 22 | 0.0000314082 |
| Chara braunii | BFEA01000721 | 3 | CH_cbr_19 | 5 | 6 | 0.00000000060406 |
| Chara braunii | BFEA01000698 | 3 | CH_cbr_20 | 5 | 6 | 0.00000000060406 |
| Citrus clementina | scaffold_2 | 3 | CH_ccl_262 | 4 | 7 | 0.0000196683 |
| Cardamine hirsuta | Chr8 | 3 | CH_chi_307 | 3 | 3 | 0.000284597 |
| Carya illinoinensis | Chr15 | 3 | CH_cil_47 | 9 | 11 | 2.41265e-18 |
| Davidia involucrata | GWHABJS00000002 | 3 | CH_din_340 | 3 | 3 | 0.000357503 |
| Erigeron canadensis | Conyza_canadensis_scaffold:5 | 3 | CH_eca_57 | 5 | 5 | 0.000000000271781 |
| Gossypium raimondii | Chr08 | 3 | CH_gra_348 | 3 | 3 | 0.000635654 |
| Hydrangea macrophylla | Hma1.2p1_0196F.1 | 3 | CH_hma_125 | 4 | 9 | 0.0000379566 |
| Lotus japonicus | Contig00081 | 3 | CH_lja_306 | 3 | 3 | 0.000419873 |
| Lactuca sativa | Lsat_1_v8_lg_7 | 3 | CH_lsa_126 | 5 | 5 | 0.00000000125875 |
| Magnolia biondii | Chr05 | 3 | CH_mbi_454 | 3 | 3 | 0.000127336 |
| Malus domestica | Chr13 | 3 | CH_mdo_620 | 3 | 3 | 0.00039281 |
| Malus domestica | Chr12 | 3 | CH_mdo_621 | 3 | 3 | 0.00039281 |
| Marchantia polymorpha | scaffold_10 | 3 | CH_mpo_25 | 5 | 5 | 0.00000000107446 |
| Nelumbo nucifera | chr6 | 3 | CH_nnu_61 | 5 | 6 | 0.00000000660041 |
| Prunus persica | Pp06 | 3 | CH_ppe_396 | 3 | 3 | 0.000231385 |
| Pisum sativum | chr5LG3 | 3 | CH_psa_252 | 3 | 3 | 0.000101241 |
| Pisum sativum | chr2LG1 | 3 | CH_psa_253 | 3 | 3 | 0.000101241 |
| Papaver somniferum | NW_020628818.1 | 3 | CH_pso_373 | 5 | 20 | 0.0000105844 |
| Populus trichocarpa | Chr07 | 3 | CH_ptr_36 | 9 | 9 | 2.07654e-19 |
| Quercus lobata | 4 | 3 | CH_qlo_368 | 8 | 60 | 0.0000000152585 |
| Rosa chinensis | RcHm_v2.0_Chr5 | 3 | CH_rch_656 | 3 | 3 | 0.0002616 |
| Rhododendron simsii | chr05 | 3 | CH_rsi_431 | 3 | 3 | 0.000248055 |
| Sapria himalayana | scaffold45_4472430 | 3 | CH_shi_179 | 3 | 3 | 0.000114894 |
| Sapria himalayana | scaffold14_12630789 | 3 | CH_shi_180 | 3 | 3 | 0.000114894 |
| Vaccinium macrocarpon | chr5_Vaccinium_macrocarpon_Stevens_v1 | 3 | CH_vma_319 | 3 | 3 | 0.000321283 |
| Vanilla planifolia | CM028162.1 | 3 | CH_vpl_1 | 18 | 47 | 7.16285e-30 |
| Vanilla planifolia | CM028158.1 | 3 | CH_vpl_296 | 4 | 10 | 0.000438333 |
| Amborella trichopoda | AmTr_v1.0_scaffold00146 | 4 | CH_atr_112 | 4 | 4 | 0.000000346415 |
| Camellia sinensis var. sinensis | Chr3 | 4 | CH_camsi_476 | 5 | 22 | 0.0000314082 |
| Chara braunii | BFEA01000721 | 4 | CH_cbr_19 | 5 | 6 | 0.00000000060406 |
| Chara braunii | BFEA01000698 | 4 | CH_cbr_20 | 5 | 6 | 0.00000000060406 |
| Citrus clementina | scaffold_2 | 4 | CH_ccl_262 | 4 | 7 | 0.0000196683 |
| Cardamine hirsuta | Chr8 | 4 | CH_chi_307 | 3 | 3 | 0.000284597 |
| Carya illinoinensis | Chr15 | 4 | CH_cil_47 | 9 | 11 | 2.41265e-18 |
| Davidia involucrata | GWHABJS00000002 | 4 | CH_din_340 | 3 | 3 | 0.000357503 |
| Erigeron canadensis | Conyza_canadensis_scaffold:5 | 4 | CH_eca_57 | 5 | 5 | 0.000000000271781 |
| Gossypium raimondii | Chr08 | 4 | CH_gra_348 | 3 | 3 | 0.000635654 |
| Hydrangea macrophylla | Hma1.2p1_0196F.1 | 4 | CH_hma_125 | 4 | 9 | 0.0000379566 |
| Lotus japonicus | Contig00081 | 4 | CH_lja_306 | 3 | 3 | 0.000419873 |
| Lactuca sativa | Lsat_1_v8_lg_7 | 4 | CH_lsa_126 | 5 | 5 | 0.00000000125875 |
| Magnolia biondii | Chr05 | 4 | CH_mbi_454 | 3 | 3 | 0.000127336 |
| Malus domestica | Chr13 | 4 | CH_mdo_620 | 3 | 3 | 0.00039281 |
| Malus domestica | Chr12 | 4 | CH_mdo_621 | 3 | 3 | 0.00039281 |
| Marchantia polymorpha | scaffold_10 | 4 | CH_mpo_25 | 5 | 5 | 0.00000000107446 |
| Nelumbo nucifera | chr6 | 4 | CH_nnu_61 | 5 | 6 | 0.00000000660041 |
| Prunus persica | Pp06 | 4 | CH_ppe_396 | 3 | 3 | 0.000231385 |
| Pisum sativum | chr5LG3 | 4 | CH_psa_252 | 3 | 3 | 0.000101241 |
| Pisum sativum | chr2LG1 | 4 | CH_psa_253 | 3 | 3 | 0.000101241 |
| Papaver somniferum | NW_020628818.1 | 4 | CH_pso_373 | 5 | 20 | 0.0000105844 |
| Populus trichocarpa | Chr07 | 4 | CH_ptr_36 | 9 | 9 | 2.07654e-19 |
| Quercus lobata | 4 | 4 | CH_qlo_368 | 8 | 60 | 0.0000000152585 |
| Rosa chinensis | RcHm_v2.0_Chr5 | 4 | CH_rch_656 | 3 | 3 | 0.0002616 |
| Rhododendron simsii | chr05 | 4 | CH_rsi_431 | 3 | 3 | 0.000248055 |
| Sapria himalayana | scaffold45_4472430 | 4 | CH_shi_179 | 3 | 3 | 0.000114894 |
| Sapria himalayana | scaffold14_12630789 | 4 | CH_shi_180 | 3 | 3 | 0.000114894 |
| Vaccinium macrocarpon | chr5_Vaccinium_macrocarpon_Stevens_v1 | 4 | CH_vma_319 | 3 | 3 | 0.000321283 |
| Vanilla planifolia | CM028162.1 | 4 | CH_vpl_1 | 18 | 47 | 7.16285e-30 |
| Vanilla planifolia | CM028158.1 | 4 | CH_vpl_296 | 4 | 10 | 0.000438333 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |