Functional clusters
Information
- Type Gene Ontology
- Description actin filament binding
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Anthoceros agrestis | Sc2ySwM_340 | 3 | CH_aag_102 | 3 | 4 | 0.0000513726 |
| Camellia sinensis var. sinensis | Chr4 | 3 | CH_camsi_137 | 6 | 15 | 0.000000000184678 |
| Camellia sinensis var. sinensis | Chr9 | 3 | CH_camsi_633 | 3 | 4 | 0.000178891 |
| Carya illinoinensis | Chr06 | 3 | CH_cil_472 | 3 | 5 | 0.000410821 |
| Eucalyptus grandis | Chr06 | 3 | CH_egr_419 | 4 | 4 | 0.0000000354316 |
| Gossypium hirsutum | A02 | 3 | CH_ghi_442 | 3 | 3 | 0.000125642 |
| Gossypium hirsutum | D03 | 3 | CH_ghi_607 | 3 | 4 | 0.000502123 |
| Glycine max | Gm06 | 3 | CH_gma_349 | 3 | 3 | 0.000158077 |
| Gossypium raimondii | Chr03 | 3 | CH_gra_311 | 3 | 4 | 0.000380731 |
| Helianthus annuus | HanXRQChr03 | 3 | CH_han_492 | 3 | 3 | 0.0000766511 |
| Helianthus annuus | HanXRQChr11 | 3 | CH_han_615 | 3 | 4 | 0.000306345 |
| Hydrangea macrophylla | Hma1.2p1_0235F.1 | 3 | CH_hma_114 | 3 | 3 | 0.0000211029 |
| Lotus japonicus | chr1 | 3 | CH_lja_46 | 5 | 5 | 0.000000000129062 |
| Magnolia biondii | Chr06 | 3 | CH_mbi_379 | 3 | 3 | 0.0000298473 |
| Medicago truncatula | chr3 | 3 | CH_mtr_302 | 4 | 5 | 0.00000015491 |
| Papaver somniferum | NC_039363.1 | 3 | CH_pso_14 | 12 | 24 | 2.43898e-26 |
| Papaver somniferum | NC_039358.1 | 3 | CH_pso_50 | 8 | 15 | 1.55047e-16 |
| Quercus lobata | CM012294 | 3 | CH_qlo_382 | 5 | 12 | 0.0000000183078 |
| Sequoiadendron giganteum | chr7 | 3 | CH_sgi_1375 | 3 | 8 | 0.000986043 |
| Sequoiadendron giganteum | chr7 | 3 | CH_sgi_505 | 4 | 4 | 0.0000000124728 |
| Sapria himalayana | scaffold5_19632047 | 3 | CH_shi_107 | 3 | 3 | 0.0000047525 |
| Sapria himalayana | scaffold42_4718812 | 3 | CH_shi_186 | 3 | 8 | 0.00016609 |
| Vanilla planifolia | CM028151.1 | 3 | CH_vpl_4 | 11 | 20 | 4.66998e-21 |
| Anthoceros agrestis | Sc2ySwM_340 | 4 | CH_aag_102 | 3 | 4 | 0.0000513726 |
| Camellia sinensis var. sinensis | Chr4 | 4 | CH_camsi_137 | 6 | 15 | 0.000000000184678 |
| Camellia sinensis var. sinensis | Chr9 | 4 | CH_camsi_633 | 3 | 4 | 0.000178891 |
| Carya illinoinensis | Chr06 | 4 | CH_cil_472 | 3 | 5 | 0.000410821 |
| Eucalyptus grandis | Chr06 | 4 | CH_egr_419 | 4 | 4 | 0.0000000354316 |
| Gossypium hirsutum | A02 | 4 | CH_ghi_442 | 3 | 3 | 0.000125642 |
| Gossypium hirsutum | D03 | 4 | CH_ghi_607 | 3 | 4 | 0.000502123 |
| Glycine max | Gm06 | 4 | CH_gma_349 | 3 | 3 | 0.000158077 |
| Gossypium raimondii | Chr03 | 4 | CH_gra_311 | 3 | 4 | 0.000380731 |
| Helianthus annuus | HanXRQChr03 | 4 | CH_han_492 | 3 | 3 | 0.0000766511 |
| Helianthus annuus | HanXRQChr11 | 4 | CH_han_615 | 3 | 4 | 0.000306345 |
| Hydrangea macrophylla | Hma1.2p1_0235F.1 | 4 | CH_hma_114 | 3 | 3 | 0.0000211029 |
| Lotus japonicus | chr1 | 4 | CH_lja_46 | 5 | 5 | 0.000000000129062 |
| Magnolia biondii | Chr06 | 4 | CH_mbi_379 | 3 | 3 | 0.0000298473 |
| Medicago truncatula | chr3 | 4 | CH_mtr_302 | 4 | 5 | 0.00000015491 |
| Papaver somniferum | NC_039363.1 | 4 | CH_pso_14 | 12 | 24 | 2.43898e-26 |
| Papaver somniferum | NC_039358.1 | 4 | CH_pso_50 | 8 | 15 | 1.55047e-16 |
| Quercus lobata | CM012294 | 4 | CH_qlo_382 | 5 | 12 | 0.0000000183078 |
| Sequoiadendron giganteum | chr7 | 4 | CH_sgi_1375 | 3 | 8 | 0.000986043 |
| Sequoiadendron giganteum | chr7 | 4 | CH_sgi_505 | 4 | 4 | 0.0000000124728 |
| Sapria himalayana | scaffold5_19632047 | 4 | CH_shi_107 | 3 | 3 | 0.0000047525 |
| Sapria himalayana | scaffold42_4718812 | 4 | CH_shi_186 | 3 | 8 | 0.00016609 |
| Vanilla planifolia | CM028151.1 | 4 | CH_vpl_4 | 11 | 20 | 4.66998e-21 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |