Functional clusters
Information
- Type Gene Ontology
- Description defense response to fungus
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Arabidopsis lyrata | scaffold_5 | 3 | CH_aly_275 | 4 | 4 | 0.000351677 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.11 | 3 | CH_arhy_297 | 9 | 27 | 0.000000382743 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.14 | 3 | CH_arhy_315 | 7 | 12 | 0.000000680448 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.01 | 3 | CH_arhy_386 | 7 | 15 | 0.00000537932 |
| Brassica carinata | ChrB04 | 3 | CH_bca_658 | 4 | 4 | 0.000171851 |
| Brassica napus | C09 | 3 | CH_bna_433 | 6 | 16 | 0.0000605873 |
| Brassica napus | A09 | 3 | CH_bna_542 | 5 | 10 | 0.00030368 |
| Brassica napus | C07 | 3 | CH_bna_543 | 5 | 10 | 0.00030368 |
| Brassica oleracea | C9 | 3 | CH_bol_292 | 4 | 4 | 0.000139099 |
| Camellia sinensis var. sinensis | Chr6 | 3 | CH_camsi_374 | 6 | 8 | 0.00000280059 |
| Camellia sinensis var. sinensis | Chr1 | 3 | CH_camsi_655 | 8 | 35 | 0.000238261 |
| Cannabis sativa | NC_044377.1 | 3 | CH_cansat_353 | 10 | 80 | 0.000677806 |
| Corylus avellana | 11 | 3 | CH_cav_437 | 5 | 9 | 0.000990824 |
| Citrus clementina | scaffold_9 | 3 | CH_ccl_243 | 6 | 8 | 0.00000755461 |
| Citrus clementina | scaffold_2 | 3 | CH_ccl_257 | 9 | 31 | 0.0000135091 |
| Carpinus fangiana | Cfa01 | 3 | CH_cfa_279 | 5 | 8 | 0.00022983 |
| Carya illinoinensis | Chr05 | 3 | CH_cil_262 | 7 | 12 | 0.00000414924 |
| Fragaria x ananassa | Fvb6-1 | 3 | CH_fan_101 | 9 | 19 | 0.00000000406112 |
| Fragaria x ananassa | Fvb1-2 | 3 | CH_fan_209 | 8 | 22 | 0.00000149766 |
| Fragaria x ananassa | Fvb6-2 | 3 | CH_fan_262 | 5 | 5 | 0.00000693281 |
| Fragaria x ananassa | Fvb1-1 | 3 | CH_fan_334 | 5 | 6 | 0.0000412803 |
| Fragaria x ananassa | Fvb1-4 | 3 | CH_fan_352 | 7 | 21 | 0.0000599196 |
| Fragaria x ananassa | Fvb5-1 | 3 | CH_fan_398 | 5 | 7 | 0.000143381 |
| Fragaria x ananassa | Fvb1-3 | 3 | CH_fan_405 | 6 | 14 | 0.000178369 |
| Fragaria vesca | Fvb5 | 3 | CH_fve_133 | 8 | 16 | 0.000000104786 |
| Fragaria vesca | Fvb1 | 3 | CH_fve_7 | 21 | 43 | 2.43515e-25 |
| Glycine max | Gm16 | 3 | CH_gma_79 | 12 | 38 | 0.000000000395703 |
| Gossypium raimondii | Chr05 | 3 | CH_gra_168 | 5 | 5 | 0.00000471873 |
| Helianthus annuus | HanXRQChr07 | 3 | CH_han_237 | 6 | 6 | 0.0000000541742 |
| Lonicera japonica | GWHAAZE00000004 | 3 | CH_lonja_369 | 5 | 6 | 0.0000420136 |
| Lonicera japonica | GWHAAZE00000007 | 3 | CH_lonja_40 | 18 | 32 | 1.49226e-22 |
| Magnolia biondii | Chr17 | 3 | CH_mbi_381 | 11 | 80 | 0.0000319706 |
| Magnolia biondii | Chr11 | 3 | CH_mbi_553 | 7 | 26 | 0.000294038 |
| Malus domestica | Chr02 | 3 | CH_mdo_12 | 16 | 21 | 2.86608e-23 |
| Malus domestica | Chr01 | 3 | CH_mdo_332 | 7 | 16 | 0.00000920412 |
| Malus domestica | Chr15 | 3 | CH_mdo_42 | 12 | 18 | 0.00000000000000208803 |
| Malus domestica | Chr03 | 3 | CH_mdo_81 | 15 | 60 | 0.00000000000478495 |
| Medicago truncatula | chr8 | 3 | CH_mtr_185 | 12 | 51 | 0.000000000623384 |
| Medicago truncatula | chr1 | 3 | CH_mtr_606 | 4 | 4 | 0.000241429 |
| Punica granatum | NC_045134.1 | 3 | CH_pgr_147 | 10 | 30 | 0.000000273312 |
| Punica granatum | NC_045129.1 | 3 | CH_pgr_290 | 5 | 6 | 0.000108714 |
| Prunus persica | Pp02 | 3 | CH_ppe_250 | 11 | 46 | 0.00000427152 |
| Prunus persica | Pp07 | 3 | CH_ppe_28 | 16 | 22 | 3.71548e-20 |
| Prunus persica | Pp02 | 3 | CH_ppe_401 | 9 | 39 | 0.000286277 |
| Pisum sativum | chr4LG4 | 3 | CH_psa_187 | 5 | 7 | 0.0000210771 |
| Populus trichocarpa | Chr07 | 3 | CH_ptr_248 | 6 | 7 | 0.00000201422 |
| Populus trichocarpa | Chr15 | 3 | CH_ptr_69 | 11 | 14 | 0.0000000000000569588 |
| Phaseolus vulgaris | Chr08 | 3 | CH_pvu_145 | 6 | 7 | 0.000000935163 |
| Quercus lobata | 6 | 3 | CH_qlo_27 | 19 | 24 | 6.6559e-28 |
| Quercus lobata | 1 | 3 | CH_qlo_866 | 7 | 22 | 0.000244861 |
| Rosa chinensis | RcHm_v2.0_Chr2 | 3 | CH_rch_6 | 29 | 70 | 2.56573e-35 |
| Salix brachista | GWHAAZH00000007 | 3 | CH_sbr_37 | 9 | 9 | 0.000000000000126287 |
| Simmondsia chinensis | GWHAASQ00000001 | 3 | CH_sci_234 | 5 | 8 | 0.000411917 |
| Sequoiadendron giganteum | chr4 | 3 | CH_sgi_1242 | 5 | 6 | 0.000302879 |
| Sequoiadendron giganteum | chr6 | 3 | CH_sgi_19 | 30 | 45 | 2.43019e-38 |
| Sequoiadendron giganteum | chr6 | 3 | CH_sgi_55 | 26 | 56 | 5.72713e-27 |
| Sequoiadendron giganteum | chr1 | 3 | CH_sgi_896 | 6 | 8 | 0.0000229718 |
| Sequoiadendron giganteum | chr11 | 3 | CH_sgi_93 | 15 | 15 | 7.13282e-23 |
| Solanum pennellii | Spenn-ch01 | 3 | CH_spe_358 | 6 | 19 | 0.000177333 |
| Trifolium pratense | Tp57577_TGAC_v2_LG3 | 3 | CH_tpr_368 | 9 | 69 | 0.000818385 |
| Trifolium pratense | Tp57577_TGAC_v2_scaf_459 | 3 | CH_tpr_39 | 7 | 7 | 0.000000000255949 |
| Vitis vinifera | chr10 | 3 | CH_vvi_397 | 4 | 4 | 0.000680539 |
| Vitis vinifera | chr7 | 3 | CH_vvi_76 | 10 | 15 | 0.00000000000735129 |
| Arabidopsis lyrata | scaffold_5 | 4 | CH_aly_275 | 4 | 4 | 0.000351677 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.11 | 4 | CH_arhy_297 | 9 | 27 | 0.000000382743 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.14 | 4 | CH_arhy_315 | 7 | 12 | 0.000000680448 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.01 | 4 | CH_arhy_386 | 7 | 15 | 0.00000537932 |
| Brassica carinata | ChrB04 | 4 | CH_bca_658 | 4 | 4 | 0.000171851 |
| Brassica napus | C09 | 4 | CH_bna_433 | 6 | 16 | 0.0000605873 |
| Brassica napus | A09 | 4 | CH_bna_542 | 5 | 10 | 0.00030368 |
| Brassica napus | C07 | 4 | CH_bna_543 | 5 | 10 | 0.00030368 |
| Brassica oleracea | C9 | 4 | CH_bol_292 | 4 | 4 | 0.000139099 |
| Camellia sinensis var. sinensis | Chr6 | 4 | CH_camsi_374 | 6 | 8 | 0.00000280059 |
| Camellia sinensis var. sinensis | Chr1 | 4 | CH_camsi_655 | 8 | 35 | 0.000238261 |
| Cannabis sativa | NC_044377.1 | 4 | CH_cansat_353 | 10 | 80 | 0.000677806 |
| Corylus avellana | 11 | 4 | CH_cav_437 | 5 | 9 | 0.000990824 |
| Citrus clementina | scaffold_9 | 4 | CH_ccl_243 | 6 | 8 | 0.00000755461 |
| Citrus clementina | scaffold_2 | 4 | CH_ccl_257 | 9 | 31 | 0.0000135091 |
| Carpinus fangiana | Cfa01 | 4 | CH_cfa_279 | 5 | 8 | 0.00022983 |
| Carya illinoinensis | Chr05 | 4 | CH_cil_262 | 7 | 12 | 0.00000414924 |
| Fragaria x ananassa | Fvb6-1 | 4 | CH_fan_101 | 9 | 19 | 0.00000000406112 |
| Fragaria x ananassa | Fvb1-2 | 4 | CH_fan_209 | 8 | 22 | 0.00000149766 |
| Fragaria x ananassa | Fvb6-2 | 4 | CH_fan_262 | 5 | 5 | 0.00000693281 |
| Fragaria x ananassa | Fvb1-1 | 4 | CH_fan_334 | 5 | 6 | 0.0000412803 |
| Fragaria x ananassa | Fvb1-4 | 4 | CH_fan_352 | 7 | 21 | 0.0000599196 |
| Fragaria x ananassa | Fvb5-1 | 4 | CH_fan_398 | 5 | 7 | 0.000143381 |
| Fragaria x ananassa | Fvb1-3 | 4 | CH_fan_405 | 6 | 14 | 0.000178369 |
| Fragaria vesca | Fvb5 | 4 | CH_fve_133 | 8 | 16 | 0.000000104786 |
| Fragaria vesca | Fvb1 | 4 | CH_fve_7 | 21 | 43 | 2.43515e-25 |
| Glycine max | Gm16 | 4 | CH_gma_79 | 12 | 38 | 0.000000000395703 |
| Gossypium raimondii | Chr05 | 4 | CH_gra_168 | 5 | 5 | 0.00000471873 |
| Helianthus annuus | HanXRQChr07 | 4 | CH_han_237 | 6 | 6 | 0.0000000541742 |
| Lonicera japonica | GWHAAZE00000004 | 4 | CH_lonja_369 | 5 | 6 | 0.0000420136 |
| Lonicera japonica | GWHAAZE00000007 | 4 | CH_lonja_40 | 18 | 32 | 1.49226e-22 |
| Magnolia biondii | Chr17 | 4 | CH_mbi_381 | 11 | 80 | 0.0000319706 |
| Magnolia biondii | Chr11 | 4 | CH_mbi_553 | 7 | 26 | 0.000294038 |
| Malus domestica | Chr02 | 4 | CH_mdo_12 | 16 | 21 | 2.86608e-23 |
| Malus domestica | Chr01 | 4 | CH_mdo_332 | 7 | 16 | 0.00000920412 |
| Malus domestica | Chr15 | 4 | CH_mdo_42 | 12 | 18 | 0.00000000000000208803 |
| Malus domestica | Chr03 | 4 | CH_mdo_81 | 15 | 60 | 0.00000000000478495 |
| Medicago truncatula | chr8 | 4 | CH_mtr_185 | 12 | 51 | 0.000000000623384 |
| Medicago truncatula | chr1 | 4 | CH_mtr_606 | 4 | 4 | 0.000241429 |
| Punica granatum | NC_045134.1 | 4 | CH_pgr_147 | 10 | 30 | 0.000000273312 |
| Punica granatum | NC_045129.1 | 4 | CH_pgr_290 | 5 | 6 | 0.000108714 |
| Prunus persica | Pp02 | 4 | CH_ppe_250 | 11 | 46 | 0.00000427152 |
| Prunus persica | Pp07 | 4 | CH_ppe_28 | 16 | 22 | 3.71548e-20 |
| Prunus persica | Pp02 | 4 | CH_ppe_401 | 9 | 39 | 0.000286277 |
| Pisum sativum | chr4LG4 | 4 | CH_psa_187 | 5 | 7 | 0.0000210771 |
| Populus trichocarpa | Chr07 | 4 | CH_ptr_248 | 6 | 7 | 0.00000201422 |
| Populus trichocarpa | Chr15 | 4 | CH_ptr_69 | 11 | 14 | 0.0000000000000569588 |
| Phaseolus vulgaris | Chr08 | 4 | CH_pvu_145 | 6 | 7 | 0.000000935163 |
| Quercus lobata | 6 | 4 | CH_qlo_27 | 19 | 24 | 6.6559e-28 |
| Quercus lobata | 1 | 4 | CH_qlo_866 | 7 | 22 | 0.000244861 |
| Rosa chinensis | RcHm_v2.0_Chr2 | 4 | CH_rch_6 | 29 | 70 | 2.56573e-35 |
| Salix brachista | GWHAAZH00000007 | 4 | CH_sbr_37 | 9 | 9 | 0.000000000000126287 |
| Simmondsia chinensis | GWHAASQ00000001 | 4 | CH_sci_234 | 5 | 8 | 0.000411917 |
| Sequoiadendron giganteum | chr4 | 4 | CH_sgi_1242 | 5 | 6 | 0.000302879 |
| Sequoiadendron giganteum | chr6 | 4 | CH_sgi_19 | 30 | 45 | 2.43019e-38 |
| Sequoiadendron giganteum | chr6 | 4 | CH_sgi_55 | 26 | 56 | 5.72713e-27 |
| Sequoiadendron giganteum | chr1 | 4 | CH_sgi_896 | 6 | 8 | 0.0000229718 |
| Sequoiadendron giganteum | chr11 | 4 | CH_sgi_93 | 15 | 15 | 7.13282e-23 |
| Solanum pennellii | Spenn-ch01 | 4 | CH_spe_358 | 6 | 19 | 0.000177333 |
| Trifolium pratense | Tp57577_TGAC_v2_LG3 | 4 | CH_tpr_368 | 9 | 69 | 0.000818385 |
| Trifolium pratense | Tp57577_TGAC_v2_scaf_459 | 4 | CH_tpr_39 | 7 | 7 | 0.000000000255949 |
| Vitis vinifera | chr10 | 4 | CH_vvi_397 | 4 | 4 | 0.000680539 |
| Vitis vinifera | chr7 | 4 | CH_vvi_76 | 10 | 15 | 0.00000000000735129 |
Available child term results
| Ontology identifier | Description | Number of clusters |
|---|---|---|
| GO:0061760 | antifungal innate immune response | 2 |
| GO:1900150 | regulation of defense response to fungus | 12 |
| GO:1905034 | regulation of antifungal innate immune response | 8 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |