Functional clusters
Information
- Type Gene Ontology
- Description hydroxycinnamoyltransferase activity
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Amborella trichopoda | AmTr_v1.0_scaffold00058 | 3 | CH_atr_133 | 3 | 3 | 0.00000208266 |
| Amborella trichopoda | AmTr_v1.0_scaffold00002 | 3 | CH_atr_44 | 5 | 8 | 0.0000000000132403 |
| Beta vulgaris | Chr3_EL10_PGA_scaffold7 | 3 | CH_bvu_128 | 4 | 61 | 0.00000442394 |
| Carya illinoinensis | Chr06 | 3 | CH_cil_77 | 5 | 6 | 0.000000000000167382 |
| Carica papaya | supercontig_46 | 3 | CH_cpa_55 | 3 | 3 | 0.0000000542279 |
| Chenopodium quinoa | C_Quinoa_Scaffold_4199 | 3 | CH_cqu_351 | 3 | 12 | 0.0000887883 |
| Chenopodium quinoa | C_Quinoa_Scaffold_4244 | 3 | CH_cqu_538 | 3 | 24 | 0.000815402 |
| Durio zibethinus | NW_019168481.1 | 3 | CH_dzi_118 | 3 | 4 | 0.000000451094 |
| Lotus japonicus | chr3 | 3 | CH_lja_67 | 4 | 5 | 0.00000000271448 |
| Medicago truncatula | chr1 | 3 | CH_mtr_393 | 3 | 9 | 0.00000425236 |
| Nelumbo nucifera | chr7 | 3 | CH_nnu_21 | 6 | 11 | 0.00000000000000248938 |
| Oryza sativa ssp. japonica | chr06 | 3 | CH_osa_249 | 3 | 5 | 0.0000190263 |
| Papaver somniferum | NC_039362.1 | 3 | CH_pso_39 | 8 | 23 | 3.57737e-18 |
| Salvia bowleyana | GWHASIU00000001 | 3 | CH_sbo_270 | 3 | 4 | 0.00000844385 |
| Tripterygium wilfordii | NC_052235.1 | 3 | CH_twi_145 | 3 | 3 | 0.00000380956 |
| Amborella trichopoda | AmTr_v1.0_scaffold00058 | 4 | CH_atr_133 | 3 | 3 | 0.00000208266 |
| Amborella trichopoda | AmTr_v1.0_scaffold00002 | 4 | CH_atr_44 | 5 | 8 | 0.0000000000132403 |
| Beta vulgaris | Chr3_EL10_PGA_scaffold7 | 4 | CH_bvu_128 | 4 | 61 | 0.00000442394 |
| Carya illinoinensis | Chr06 | 4 | CH_cil_77 | 5 | 6 | 0.000000000000167382 |
| Carica papaya | supercontig_46 | 4 | CH_cpa_55 | 3 | 3 | 0.0000000542279 |
| Chenopodium quinoa | C_Quinoa_Scaffold_4199 | 4 | CH_cqu_351 | 3 | 12 | 0.0000887883 |
| Chenopodium quinoa | C_Quinoa_Scaffold_4244 | 4 | CH_cqu_538 | 3 | 24 | 0.000815402 |
| Durio zibethinus | NW_019168481.1 | 4 | CH_dzi_118 | 3 | 4 | 0.000000451094 |
| Lotus japonicus | chr3 | 4 | CH_lja_67 | 4 | 5 | 0.00000000271448 |
| Medicago truncatula | chr1 | 4 | CH_mtr_393 | 3 | 9 | 0.00000425236 |
| Nelumbo nucifera | chr7 | 4 | CH_nnu_21 | 6 | 11 | 0.00000000000000248938 |
| Oryza sativa ssp. japonica | chr06 | 4 | CH_osa_249 | 3 | 5 | 0.0000190263 |
| Papaver somniferum | NC_039362.1 | 4 | CH_pso_39 | 8 | 23 | 3.57737e-18 |
| Salvia bowleyana | GWHASIU00000001 | 4 | CH_sbo_270 | 3 | 4 | 0.00000844385 |
| Tripterygium wilfordii | NC_052235.1 | 4 | CH_twi_145 | 3 | 3 | 0.00000380956 |
Available child term results
| Ontology identifier | Description | Number of clusters |
|---|---|---|
| GO:0047172 | shikimate O-hydroxycinnamoyltransferase activity | 2 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |