Functional clusters
Information
- Type Gene Ontology
- Description L-gulonolactone oxidase activity
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Arabidopsis lyrata | scaffold_4 | 3 | CH_aly_78 | 3 | 3 | 0.0000000261404 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.16 | 3 | CH_arhy_689 | 2 | 2 | 0.000838273 |
| Arabidopsis thaliana | Chr2 | 3 | CH_ath_143 | 3 | 3 | 0.0000000430914 |
| Brassica carinata | ChrC03 | 3 | CH_bca_990 | 2 | 3 | 0.000961902 |
| Brassica napus | C02 | 3 | CH_bna_283 | 3 | 10 | 0.00000347187 |
| Brassica napus | C04 | 3 | CH_bna_607 | 2 | 2 | 0.000519726 |
| Brassica oleracea | C2 | 3 | CH_bol_405 | 2 | 5 | 0.000980504 |
| Brassica rapa | A05 | 3 | CH_bra_70 | 3 | 3 | 0.0000000552942 |
| Cannabis sativa | NC_044371.1 | 3 | CH_cansat_44 | 5 | 12 | 0.000000000000662452 |
| Corylus avellana | 11 | 3 | CH_cav_329 | 2 | 2 | 0.000230008 |
| Coffea canephora | chr11 | 3 | CH_ccan_161 | 3 | 64 | 0.00000884225 |
| Carpinus fangiana | Cfa01 | 3 | CH_cfa_262 | 2 | 2 | 0.000227204 |
| Corchorus olitorius | AWUE01016487.1 | 3 | CH_col_76 | 2 | 2 | 0.000292099 |
| Chenopodium quinoa | C_Quinoa_Scaffold_1447 | 3 | CH_cqu_526 | 2 | 2 | 0.000710732 |
| Fragaria x ananassa | Fvb7-3 | 3 | CH_fan_299 | 3 | 10 | 0.0000176164 |
| Glycine max | Gm16 | 3 | CH_gma_161 | 3 | 3 | 0.000000121016 |
| Helianthus annuus | HanXRQChr09 | 3 | CH_han_294 | 3 | 5 | 0.000000447934 |
| Lupinus albus | Lalb_Chr03 | 3 | CH_lal_367 | 2 | 2 | 0.000524824 |
| Lupinus albus | Lalb_Chr24 | 3 | CH_lal_368 | 2 | 2 | 0.000524824 |
| Lotus japonicus | chr1 | 3 | CH_lja_316 | 2 | 2 | 0.000429046 |
| Malus domestica | Chr01 | 3 | CH_mdo_604 | 2 | 2 | 0.000379212 |
| Punica granatum | NC_045131.1 | 3 | CH_pgr_318 | 2 | 2 | 0.000225107 |
| Pisum sativum | chr6LG2 | 3 | CH_psa_318 | 2 | 2 | 0.000312981 |
| Populus trichocarpa | Chr02 | 3 | CH_ptr_359 | 2 | 2 | 0.0001734 |
| Quercus lobata | 8 | 3 | CH_qlo_377 | 3 | 3 | 0.0000000159937 |
| Rhododendron simsii | chr01 | 3 | CH_rsi_198 | 3 | 4 | 0.0000000999387 |
| Sequoiadendron giganteum | chr1 | 3 | CH_sgi_451 | 4 | 9 | 0.00000000305767 |
| Selaginella moellendorffii | scaffold_52 | 3 | CH_smo_92 | 4 | 47 | 0.0000302382 |
| Schrenkiella parvula | ch4-6 | 3 | CH_spa_157 | 2 | 2 | 0.000236202 |
| Tripterygium wilfordii | NC_052239.1 | 3 | CH_twi_297 | 2 | 3 | 0.000502069 |
| Utricularia gibba | unitig_61 | 3 | CH_ugi_100 | 2 | 2 | 0.000246144 |
| Vigna mungo | CM024072.1 | 3 | CH_vmu_102 | 3 | 5 | 0.000000626166 |
| Arabidopsis lyrata | scaffold_4 | 4 | CH_aly_78 | 3 | 3 | 0.0000000261404 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.16 | 4 | CH_arhy_689 | 2 | 2 | 0.000838273 |
| Arabidopsis thaliana | Chr2 | 4 | CH_ath_143 | 3 | 3 | 0.0000000430914 |
| Brassica carinata | ChrC03 | 4 | CH_bca_990 | 2 | 3 | 0.000961902 |
| Brassica napus | C02 | 4 | CH_bna_283 | 3 | 10 | 0.00000347187 |
| Brassica napus | C04 | 4 | CH_bna_607 | 2 | 2 | 0.000519726 |
| Brassica oleracea | C2 | 4 | CH_bol_405 | 2 | 5 | 0.000980504 |
| Brassica rapa | A05 | 4 | CH_bra_70 | 3 | 3 | 0.0000000552942 |
| Cannabis sativa | NC_044371.1 | 4 | CH_cansat_44 | 5 | 12 | 0.000000000000662452 |
| Corylus avellana | 11 | 4 | CH_cav_329 | 2 | 2 | 0.000230008 |
| Coffea canephora | chr11 | 4 | CH_ccan_161 | 3 | 64 | 0.00000884225 |
| Carpinus fangiana | Cfa01 | 4 | CH_cfa_262 | 2 | 2 | 0.000227204 |
| Corchorus olitorius | AWUE01016487.1 | 4 | CH_col_76 | 2 | 2 | 0.000292099 |
| Chenopodium quinoa | C_Quinoa_Scaffold_1447 | 4 | CH_cqu_526 | 2 | 2 | 0.000710732 |
| Fragaria x ananassa | Fvb7-3 | 4 | CH_fan_299 | 3 | 10 | 0.0000176164 |
| Glycine max | Gm16 | 4 | CH_gma_161 | 3 | 3 | 0.000000121016 |
| Helianthus annuus | HanXRQChr09 | 4 | CH_han_294 | 3 | 5 | 0.000000447934 |
| Lupinus albus | Lalb_Chr03 | 4 | CH_lal_367 | 2 | 2 | 0.000524824 |
| Lupinus albus | Lalb_Chr24 | 4 | CH_lal_368 | 2 | 2 | 0.000524824 |
| Lotus japonicus | chr1 | 4 | CH_lja_316 | 2 | 2 | 0.000429046 |
| Malus domestica | Chr01 | 4 | CH_mdo_604 | 2 | 2 | 0.000379212 |
| Punica granatum | NC_045131.1 | 4 | CH_pgr_318 | 2 | 2 | 0.000225107 |
| Pisum sativum | chr6LG2 | 4 | CH_psa_318 | 2 | 2 | 0.000312981 |
| Populus trichocarpa | Chr02 | 4 | CH_ptr_359 | 2 | 2 | 0.0001734 |
| Quercus lobata | 8 | 4 | CH_qlo_377 | 3 | 3 | 0.0000000159937 |
| Rhododendron simsii | chr01 | 4 | CH_rsi_198 | 3 | 4 | 0.0000000999387 |
| Sequoiadendron giganteum | chr1 | 4 | CH_sgi_451 | 4 | 9 | 0.00000000305767 |
| Selaginella moellendorffii | scaffold_52 | 4 | CH_smo_92 | 4 | 47 | 0.0000302382 |
| Schrenkiella parvula | ch4-6 | 4 | CH_spa_157 | 2 | 2 | 0.000236202 |
| Tripterygium wilfordii | NC_052239.1 | 4 | CH_twi_297 | 2 | 3 | 0.000502069 |
| Utricularia gibba | unitig_61 | 4 | CH_ugi_100 | 2 | 2 | 0.000246144 |
| Vigna mungo | CM024072.1 | 4 | CH_vmu_102 | 3 | 5 | 0.000000626166 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |