Functional clusters
Information
- Type Gene Ontology
- Description long-day photoperiodism, flowering
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Beta vulgaris | Chr3_EL10_PGA_scaffold7 | 3 | CH_bvu_20 | 8 | 16 | 0.0000000000000126379 |
| Fragaria x ananassa | Fvb6-1 | 3 | CH_fan_379 | 3 | 3 | 0.000107818 |
| Nicotiana tabacum | Nitab4.5_0000016 | 3 | CH_nta_79 | 3 | 6 | 0.0000793676 |
| Punica granatum | NC_045131.1 | 3 | CH_pgr_54 | 6 | 8 | 0.00000000000242862 |
| Quercus lobata | 7 | 3 | CH_qlo_692 | 3 | 3 | 0.0000426231 |
| Theobroma cacao | Chromosome_5 | 3 | CH_tca_259 | 3 | 3 | 0.0000574494 |
| Beta vulgaris | Chr3_EL10_PGA_scaffold7 | 4 | CH_bvu_20 | 8 | 16 | 0.0000000000000126379 |
| Fragaria x ananassa | Fvb6-1 | 4 | CH_fan_379 | 3 | 3 | 0.000107818 |
| Nicotiana tabacum | Nitab4.5_0000016 | 4 | CH_nta_79 | 3 | 6 | 0.0000793676 |
| Punica granatum | NC_045131.1 | 4 | CH_pgr_54 | 6 | 8 | 0.00000000000242862 |
| Quercus lobata | 7 | 4 | CH_qlo_692 | 3 | 3 | 0.0000426231 |
| Theobroma cacao | Chromosome_5 | 4 | CH_tca_259 | 3 | 3 | 0.0000574494 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |