Functional clusters

Information

  • Type Gene Ontology
  • Description chlorophyllase activity

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Aquilegia oxysepala CHR05 3 CH_aox_270 2 2 0.000481193
Amborella trichopoda AmTr_v1.0_scaffold00002 3 CH_atr_129 3 7 0.00000132496
Camellia sinensis var. sinensis Chr5 3 CH_camsi_340 3 6 0.00000126134
Chenopodium quinoa C_Quinoa_Scaffold_1280 3 CH_cqu_184 3 3 0.000000555667
Chenopodium quinoa C_Quinoa_Scaffold_3489 3 CH_cqu_95 4 5 0.000000000526517
Erigeron canadensis Conyza_canadensis_scaffold:3 3 CH_eca_464 2 3 0.000807658
Eucalyptus grandis Chr02 3 CH_egr_244 4 4 0.00000000000300752
Fragaria vesca Fvb4 3 CH_fve_131 3 3 0.000000104115
Glycine max Gm07 3 CH_gma_54 4 4 0.00000000000574176
Lonicera japonica GWHAAZE00000006 3 CH_lonja_259 3 5 0.000000537911
Lactuca sativa Lsat_1_v8_lg_8 3 CH_lsa_450 2 3 0.000462586
Malus domestica Chr03 3 CH_mdo_706 2 2 0.000796344
Malus domestica Chr16 3 CH_mdo_707 2 2 0.000796344
Manihot esculenta Chromosome05 3 CH_mes_403 2 2 0.000610631
Marchantia polymorpha scaffold_8 3 CH_mpo_46 3 3 0.000000365945
Medicago truncatula chr1 3 CH_mtr_622 2 2 0.000246518
Nelumbo nucifera chr1 3 CH_nnu_260 2 3 0.00028901
Populus trichocarpa Chr05 3 CH_ptr_392 2 2 0.000346801
Sechium edule LG05 3 CH_sed_244 2 2 0.000428052
Sequoiadendron giganteum chr8 3 CH_sgi_211 5 6 0.0000000000000141933
Selenicereus undatus Scaffold_10417 3 CH_sun_194 2 2 0.000435983
Vigna mungo CM024077.1 3 CH_vmu_275 2 2 0.000387685
Vanilla planifolia CM028162.1 3 CH_vpl_268 2 2 0.000221664
Vitis vinifera chr7 3 CH_vvi_187 3 6 0.00000173524
Aquilegia oxysepala CHR05 4 CH_aox_270 2 2 0.000481193
Amborella trichopoda AmTr_v1.0_scaffold00002 4 CH_atr_129 3 7 0.00000132496
Camellia sinensis var. sinensis Chr5 4 CH_camsi_340 3 6 0.00000126134
Chenopodium quinoa C_Quinoa_Scaffold_1280 4 CH_cqu_184 3 3 0.000000555667
Chenopodium quinoa C_Quinoa_Scaffold_3489 4 CH_cqu_95 4 5 0.000000000526517
Erigeron canadensis Conyza_canadensis_scaffold:3 4 CH_eca_464 2 3 0.000807658
Eucalyptus grandis Chr02 4 CH_egr_244 4 4 0.00000000000300752
Fragaria vesca Fvb4 4 CH_fve_131 3 3 0.000000104115
Glycine max Gm07 4 CH_gma_54 4 4 0.00000000000574176
Lonicera japonica GWHAAZE00000006 4 CH_lonja_259 3 5 0.000000537911
Lactuca sativa Lsat_1_v8_lg_8 4 CH_lsa_450 2 3 0.000462586
Malus domestica Chr03 4 CH_mdo_706 2 2 0.000796344
Malus domestica Chr16 4 CH_mdo_707 2 2 0.000796344
Manihot esculenta Chromosome05 4 CH_mes_403 2 2 0.000610631
Marchantia polymorpha scaffold_8 4 CH_mpo_46 3 3 0.000000365945
Medicago truncatula chr1 4 CH_mtr_622 2 2 0.000246518
Nelumbo nucifera chr1 4 CH_nnu_260 2 3 0.00028901
Populus trichocarpa Chr05 4 CH_ptr_392 2 2 0.000346801
Sechium edule LG05 4 CH_sed_244 2 2 0.000428052
Sequoiadendron giganteum chr8 4 CH_sgi_211 5 6 0.0000000000000141933
Selenicereus undatus Scaffold_10417 4 CH_sun_194 2 2 0.000435983
Vigna mungo CM024077.1 4 CH_vmu_275 2 2 0.000387685
Vanilla planifolia CM028162.1 4 CH_vpl_268 2 2 0.000221664
Vitis vinifera chr7 4 CH_vvi_187 3 6 0.00000173524

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001