Functional clusters
Information
- Type Gene Ontology
- Description pectinesterase inhibitor activity
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Aethionema arabicum | LG-10 | 3 | CH_aar_14 | 8 | 10 | 4.36059e-18 |
| Aethionema arabicum | LG-5 | 3 | CH_aar_22 | 7 | 10 | 0.000000000000011069 |
| Arabidopsis thaliana | Chr2 | 3 | CH_ath_586 | 3 | 4 | 0.000659475 |
| Brassica oleracea | C8 | 3 | CH_bol_267 | 3 | 5 | 0.00007943 |
| Brassica rapa | A02 | 3 | CH_bra_226 | 3 | 6 | 0.000224187 |
| Camellia sinensis var. sinensis | Chr1 | 3 | CH_camsi_337 | 3 | 5 | 0.00000110372 |
| Capsicum annuum | PGAv.1.6.scaffold338 | 3 | CH_can_134 | 4 | 5 | 0.0000000153862 |
| Capsicum annuum | PGAv.1.6.scaffold111 | 3 | CH_can_89 | 5 | 8 | 0.0000000000853558 |
| Citrullus lanatus | CG_Chr06 | 3 | CH_cla_74 | 3 | 3 | 0.00000537133 |
| Cucumis melo | chr05 | 3 | CH_cme_12 | 11 | 19 | 2.58503e-21 |
| Cucumis sativus L. | chr6 | 3 | CH_csa_213 | 3 | 5 | 0.000211269 |
| Cucumis sativus L. | chr6 | 3 | CH_csa_43 | 6 | 10 | 0.00000000000257176 |
| Daucus carota | DCARv2_Chr9 | 3 | CH_dca_64 | 4 | 4 | 0.000000000556509 |
| Davidia involucrata | GWHABJS00000017 | 3 | CH_din_43 | 5 | 5 | 0.00000000000054569 |
| Erythranthe guttata | scaffold_1 | 3 | CH_egut_314 | 3 | 4 | 0.000142885 |
| Erythranthe guttata | scaffold_9 | 3 | CH_egut_359 | 3 | 5 | 0.000356926 |
| Gossypium hirsutum | A11 | 3 | CH_ghi_335 | 3 | 3 | 0.00000583505 |
| Gossypium hirsutum | D07 | 3 | CH_ghi_336 | 3 | 3 | 0.00000583505 |
| Gossypium hirsutum | D11 | 3 | CH_ghi_337 | 3 | 3 | 0.00000583505 |
| Gossypium raimondii | Chr07 | 3 | CH_gra_174 | 3 | 3 | 0.00000573399 |
| Gossypium raimondii | Chr01 | 3 | CH_gra_92 | 4 | 4 | 0.00000000276678 |
| Hydrangea macrophylla | Hma1.2p1_0654F.1 | 3 | CH_hma_34 | 4 | 8 | 0.00000000215848 |
| Lupinus albus | Lalb_Chr14 | 3 | CH_lal_216 | 3 | 4 | 0.0000334357 |
| Lupinus albus | Lalb_Chr16 | 3 | CH_lal_25 | 7 | 13 | 9.7531e-16 |
| Malus domestica | Chr12 | 3 | CH_mdo_274 | 3 | 3 | 0.000000981464 |
| Manihot esculenta | Chromosome10 | 3 | CH_mes_263 | 3 | 6 | 0.0000508517 |
| Medicago truncatula | chr6 | 3 | CH_mtr_5 | 17 | 64 | 5.85107e-38 |
| Nelumbo nucifera | chr1 | 3 | CH_nnu_271 | 3 | 11 | 0.000320921 |
| Olea europaea | chr15 | 3 | CH_oeu_130 | 3 | 4 | 0.0000227293 |
| Olea europaea | scaffold93 | 3 | CH_oeu_3 | 9 | 13 | 1.96248e-23 |
| Punica granatum | NC_045127.1 | 3 | CH_pgr_43 | 5 | 5 | 0.000000000000476095 |
| Papaver somniferum | NW_020620714.1 | 3 | CH_pso_444 | 4 | 18 | 0.0000581261 |
| Papaver somniferum | NC_039358.1 | 3 | CH_pso_575 | 3 | 5 | 0.000287656 |
| Rhododendron simsii | chr01 | 3 | CH_rsi_303 | 3 | 3 | 0.0000110626 |
| Rhododendron simsii | chr04 | 3 | CH_rsi_58 | 7 | 9 | 5.01632e-17 |
| Striga asiatica | scaffold74 | 3 | CH_sas_14 | 4 | 8 | 0.0000000254025 |
| Salvia bowleyana | GWHASIU00000004 | 3 | CH_sbo_110 | 5 | 10 | 0.000000000272064 |
| Salvia bowleyana | GWHASIU00000002 | 3 | CH_sbo_121 | 5 | 13 | 0.00000000138795 |
| Salvia bowleyana | GWHASIU00000005 | 3 | CH_sbo_260 | 3 | 3 | 0.00000549925 |
| Simmondsia chinensis | GWHAASQ00000007 | 3 | CH_sci_24 | 4 | 4 | 0.000000000129633 |
| Sechium edule | LG03 | 3 | CH_sed_141 | 3 | 3 | 0.0000135212 |
| Sechium edule | LG05 | 3 | CH_sed_142 | 3 | 3 | 0.0000135212 |
| Solanum lycopersicum | SL4.0ch03 | 3 | CH_sly_529 | 3 | 4 | 0.000572303 |
| Solanum tuberosum | ST4.03ch01 | 3 | CH_stu_330 | 6 | 42 | 0.0000171261 |
| Solanum tuberosum | ST4.03ch10 | 3 | CH_stu_74 | 7 | 8 | 0.0000000000000562367 |
| Trochodendron aralioides | group17 | 3 | CH_tar_235 | 3 | 3 | 0.0000243034 |
| Trochodendron aralioides | group15 | 3 | CH_tar_93 | 4 | 4 | 0.0000000204285 |
| Theobroma cacao | Chromosome_5 | 3 | CH_tca_211 | 3 | 3 | 0.00000547137 |
| Tarenaya hassleriana | NW_010970490.1 | 3 | CH_tha_43 | 4 | 4 | 0.0000000418356 |
| Vaccinium macrocarpon | chr10_Vaccinium_macrocarpon_Stevens_v1 | 3 | CH_vma_108 | 3 | 3 | 0.000000129529 |
| Vitis vinifera | chr16 | 3 | CH_vvi_93 | 4 | 7 | 0.000000000231015 |
| Zea mays | 5 | 3 | CH_zma_311 | 3 | 6 | 0.000512368 |
| Aethionema arabicum | LG-10 | 4 | CH_aar_14 | 8 | 10 | 4.36059e-18 |
| Aethionema arabicum | LG-5 | 4 | CH_aar_22 | 7 | 10 | 0.000000000000011069 |
| Arabidopsis thaliana | Chr2 | 4 | CH_ath_586 | 3 | 4 | 0.000659475 |
| Brassica oleracea | C8 | 4 | CH_bol_267 | 3 | 5 | 0.00007943 |
| Brassica rapa | A02 | 4 | CH_bra_226 | 3 | 6 | 0.000224187 |
| Camellia sinensis var. sinensis | Chr1 | 4 | CH_camsi_337 | 3 | 5 | 0.00000110372 |
| Capsicum annuum | PGAv.1.6.scaffold338 | 4 | CH_can_134 | 4 | 5 | 0.0000000153862 |
| Capsicum annuum | PGAv.1.6.scaffold111 | 4 | CH_can_89 | 5 | 8 | 0.0000000000853558 |
| Citrullus lanatus | CG_Chr06 | 4 | CH_cla_74 | 3 | 3 | 0.00000537133 |
| Cucumis melo | chr05 | 4 | CH_cme_12 | 11 | 19 | 2.58503e-21 |
| Cucumis sativus L. | chr6 | 4 | CH_csa_213 | 3 | 5 | 0.000211269 |
| Cucumis sativus L. | chr6 | 4 | CH_csa_43 | 6 | 10 | 0.00000000000257176 |
| Daucus carota | DCARv2_Chr9 | 4 | CH_dca_64 | 4 | 4 | 0.000000000556509 |
| Davidia involucrata | GWHABJS00000017 | 4 | CH_din_43 | 5 | 5 | 0.00000000000054569 |
| Erythranthe guttata | scaffold_1 | 4 | CH_egut_314 | 3 | 4 | 0.000142885 |
| Erythranthe guttata | scaffold_9 | 4 | CH_egut_359 | 3 | 5 | 0.000356926 |
| Gossypium hirsutum | A11 | 4 | CH_ghi_335 | 3 | 3 | 0.00000583505 |
| Gossypium hirsutum | D07 | 4 | CH_ghi_336 | 3 | 3 | 0.00000583505 |
| Gossypium hirsutum | D11 | 4 | CH_ghi_337 | 3 | 3 | 0.00000583505 |
| Gossypium raimondii | Chr07 | 4 | CH_gra_174 | 3 | 3 | 0.00000573399 |
| Gossypium raimondii | Chr01 | 4 | CH_gra_92 | 4 | 4 | 0.00000000276678 |
| Hydrangea macrophylla | Hma1.2p1_0654F.1 | 4 | CH_hma_34 | 4 | 8 | 0.00000000215848 |
| Lupinus albus | Lalb_Chr14 | 4 | CH_lal_216 | 3 | 4 | 0.0000334357 |
| Lupinus albus | Lalb_Chr16 | 4 | CH_lal_25 | 7 | 13 | 9.7531e-16 |
| Malus domestica | Chr12 | 4 | CH_mdo_274 | 3 | 3 | 0.000000981464 |
| Manihot esculenta | Chromosome10 | 4 | CH_mes_263 | 3 | 6 | 0.0000508517 |
| Medicago truncatula | chr6 | 4 | CH_mtr_5 | 17 | 64 | 5.85107e-38 |
| Nelumbo nucifera | chr1 | 4 | CH_nnu_271 | 3 | 11 | 0.000320921 |
| Olea europaea | chr15 | 4 | CH_oeu_130 | 3 | 4 | 0.0000227293 |
| Olea europaea | scaffold93 | 4 | CH_oeu_3 | 9 | 13 | 1.96248e-23 |
| Punica granatum | NC_045127.1 | 4 | CH_pgr_43 | 5 | 5 | 0.000000000000476095 |
| Papaver somniferum | NW_020620714.1 | 4 | CH_pso_444 | 4 | 18 | 0.0000581261 |
| Papaver somniferum | NC_039358.1 | 4 | CH_pso_575 | 3 | 5 | 0.000287656 |
| Rhododendron simsii | chr01 | 4 | CH_rsi_303 | 3 | 3 | 0.0000110626 |
| Rhododendron simsii | chr04 | 4 | CH_rsi_58 | 7 | 9 | 5.01632e-17 |
| Striga asiatica | scaffold74 | 4 | CH_sas_14 | 4 | 8 | 0.0000000254025 |
| Salvia bowleyana | GWHASIU00000004 | 4 | CH_sbo_110 | 5 | 10 | 0.000000000272064 |
| Salvia bowleyana | GWHASIU00000002 | 4 | CH_sbo_121 | 5 | 13 | 0.00000000138795 |
| Salvia bowleyana | GWHASIU00000005 | 4 | CH_sbo_260 | 3 | 3 | 0.00000549925 |
| Simmondsia chinensis | GWHAASQ00000007 | 4 | CH_sci_24 | 4 | 4 | 0.000000000129633 |
| Sechium edule | LG03 | 4 | CH_sed_141 | 3 | 3 | 0.0000135212 |
| Sechium edule | LG05 | 4 | CH_sed_142 | 3 | 3 | 0.0000135212 |
| Solanum lycopersicum | SL4.0ch03 | 4 | CH_sly_529 | 3 | 4 | 0.000572303 |
| Solanum tuberosum | ST4.03ch01 | 4 | CH_stu_330 | 6 | 42 | 0.0000171261 |
| Solanum tuberosum | ST4.03ch10 | 4 | CH_stu_74 | 7 | 8 | 0.0000000000000562367 |
| Trochodendron aralioides | group17 | 4 | CH_tar_235 | 3 | 3 | 0.0000243034 |
| Trochodendron aralioides | group15 | 4 | CH_tar_93 | 4 | 4 | 0.0000000204285 |
| Theobroma cacao | Chromosome_5 | 4 | CH_tca_211 | 3 | 3 | 0.00000547137 |
| Tarenaya hassleriana | NW_010970490.1 | 4 | CH_tha_43 | 4 | 4 | 0.0000000418356 |
| Vaccinium macrocarpon | chr10_Vaccinium_macrocarpon_Stevens_v1 | 4 | CH_vma_108 | 3 | 3 | 0.000000129529 |
| Vitis vinifera | chr16 | 4 | CH_vvi_93 | 4 | 7 | 0.000000000231015 |
| Zea mays | 5 | 4 | CH_zma_311 | 3 | 6 | 0.000512368 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |