Functional clusters

Information

  • Type Gene Ontology
  • Description pectinesterase inhibitor activity

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Aethionema arabicum LG-10 3 CH_aar_14 8 10 4.36059e-18
Aethionema arabicum LG-5 3 CH_aar_22 7 10 0.000000000000011069
Arabidopsis thaliana Chr2 3 CH_ath_586 3 4 0.000659475
Brassica oleracea C8 3 CH_bol_267 3 5 0.00007943
Brassica rapa A02 3 CH_bra_226 3 6 0.000224187
Camellia sinensis var. sinensis Chr1 3 CH_camsi_337 3 5 0.00000110372
Capsicum annuum PGAv.1.6.scaffold338 3 CH_can_134 4 5 0.0000000153862
Capsicum annuum PGAv.1.6.scaffold111 3 CH_can_89 5 8 0.0000000000853558
Citrullus lanatus CG_Chr06 3 CH_cla_74 3 3 0.00000537133
Cucumis melo chr05 3 CH_cme_12 11 19 2.58503e-21
Cucumis sativus L. chr6 3 CH_csa_213 3 5 0.000211269
Cucumis sativus L. chr6 3 CH_csa_43 6 10 0.00000000000257176
Daucus carota DCARv2_Chr9 3 CH_dca_64 4 4 0.000000000556509
Davidia involucrata GWHABJS00000017 3 CH_din_43 5 5 0.00000000000054569
Erythranthe guttata scaffold_1 3 CH_egut_314 3 4 0.000142885
Erythranthe guttata scaffold_9 3 CH_egut_359 3 5 0.000356926
Gossypium hirsutum A11 3 CH_ghi_335 3 3 0.00000583505
Gossypium hirsutum D07 3 CH_ghi_336 3 3 0.00000583505
Gossypium hirsutum D11 3 CH_ghi_337 3 3 0.00000583505
Gossypium raimondii Chr07 3 CH_gra_174 3 3 0.00000573399
Gossypium raimondii Chr01 3 CH_gra_92 4 4 0.00000000276678
Hydrangea macrophylla Hma1.2p1_0654F.1 3 CH_hma_34 4 8 0.00000000215848
Lupinus albus Lalb_Chr14 3 CH_lal_216 3 4 0.0000334357
Lupinus albus Lalb_Chr16 3 CH_lal_25 7 13 9.7531e-16
Malus domestica Chr12 3 CH_mdo_274 3 3 0.000000981464
Manihot esculenta Chromosome10 3 CH_mes_263 3 6 0.0000508517
Medicago truncatula chr6 3 CH_mtr_5 17 64 5.85107e-38
Nelumbo nucifera chr1 3 CH_nnu_271 3 11 0.000320921
Olea europaea chr15 3 CH_oeu_130 3 4 0.0000227293
Olea europaea scaffold93 3 CH_oeu_3 9 13 1.96248e-23
Punica granatum NC_045127.1 3 CH_pgr_43 5 5 0.000000000000476095
Papaver somniferum NW_020620714.1 3 CH_pso_444 4 18 0.0000581261
Papaver somniferum NC_039358.1 3 CH_pso_575 3 5 0.000287656
Rhododendron simsii chr01 3 CH_rsi_303 3 3 0.0000110626
Rhododendron simsii chr04 3 CH_rsi_58 7 9 5.01632e-17
Striga asiatica scaffold74 3 CH_sas_14 4 8 0.0000000254025
Salvia bowleyana GWHASIU00000004 3 CH_sbo_110 5 10 0.000000000272064
Salvia bowleyana GWHASIU00000002 3 CH_sbo_121 5 13 0.00000000138795
Salvia bowleyana GWHASIU00000005 3 CH_sbo_260 3 3 0.00000549925
Simmondsia chinensis GWHAASQ00000007 3 CH_sci_24 4 4 0.000000000129633
Sechium edule LG03 3 CH_sed_141 3 3 0.0000135212
Sechium edule LG05 3 CH_sed_142 3 3 0.0000135212
Solanum lycopersicum SL4.0ch03 3 CH_sly_529 3 4 0.000572303
Solanum tuberosum ST4.03ch01 3 CH_stu_330 6 42 0.0000171261
Solanum tuberosum ST4.03ch10 3 CH_stu_74 7 8 0.0000000000000562367
Trochodendron aralioides group17 3 CH_tar_235 3 3 0.0000243034
Trochodendron aralioides group15 3 CH_tar_93 4 4 0.0000000204285
Theobroma cacao Chromosome_5 3 CH_tca_211 3 3 0.00000547137
Tarenaya hassleriana NW_010970490.1 3 CH_tha_43 4 4 0.0000000418356
Vaccinium macrocarpon chr10_Vaccinium_macrocarpon_Stevens_v1 3 CH_vma_108 3 3 0.000000129529
Vitis vinifera chr16 3 CH_vvi_93 4 7 0.000000000231015
Zea mays 5 3 CH_zma_311 3 6 0.000512368
Aethionema arabicum LG-10 4 CH_aar_14 8 10 4.36059e-18
Aethionema arabicum LG-5 4 CH_aar_22 7 10 0.000000000000011069
Arabidopsis thaliana Chr2 4 CH_ath_586 3 4 0.000659475
Brassica oleracea C8 4 CH_bol_267 3 5 0.00007943
Brassica rapa A02 4 CH_bra_226 3 6 0.000224187
Camellia sinensis var. sinensis Chr1 4 CH_camsi_337 3 5 0.00000110372
Capsicum annuum PGAv.1.6.scaffold338 4 CH_can_134 4 5 0.0000000153862
Capsicum annuum PGAv.1.6.scaffold111 4 CH_can_89 5 8 0.0000000000853558
Citrullus lanatus CG_Chr06 4 CH_cla_74 3 3 0.00000537133
Cucumis melo chr05 4 CH_cme_12 11 19 2.58503e-21
Cucumis sativus L. chr6 4 CH_csa_213 3 5 0.000211269
Cucumis sativus L. chr6 4 CH_csa_43 6 10 0.00000000000257176
Daucus carota DCARv2_Chr9 4 CH_dca_64 4 4 0.000000000556509
Davidia involucrata GWHABJS00000017 4 CH_din_43 5 5 0.00000000000054569
Erythranthe guttata scaffold_1 4 CH_egut_314 3 4 0.000142885
Erythranthe guttata scaffold_9 4 CH_egut_359 3 5 0.000356926
Gossypium hirsutum A11 4 CH_ghi_335 3 3 0.00000583505
Gossypium hirsutum D07 4 CH_ghi_336 3 3 0.00000583505
Gossypium hirsutum D11 4 CH_ghi_337 3 3 0.00000583505
Gossypium raimondii Chr07 4 CH_gra_174 3 3 0.00000573399
Gossypium raimondii Chr01 4 CH_gra_92 4 4 0.00000000276678
Hydrangea macrophylla Hma1.2p1_0654F.1 4 CH_hma_34 4 8 0.00000000215848
Lupinus albus Lalb_Chr14 4 CH_lal_216 3 4 0.0000334357
Lupinus albus Lalb_Chr16 4 CH_lal_25 7 13 9.7531e-16
Malus domestica Chr12 4 CH_mdo_274 3 3 0.000000981464
Manihot esculenta Chromosome10 4 CH_mes_263 3 6 0.0000508517
Medicago truncatula chr6 4 CH_mtr_5 17 64 5.85107e-38
Nelumbo nucifera chr1 4 CH_nnu_271 3 11 0.000320921
Olea europaea chr15 4 CH_oeu_130 3 4 0.0000227293
Olea europaea scaffold93 4 CH_oeu_3 9 13 1.96248e-23
Punica granatum NC_045127.1 4 CH_pgr_43 5 5 0.000000000000476095
Papaver somniferum NW_020620714.1 4 CH_pso_444 4 18 0.0000581261
Papaver somniferum NC_039358.1 4 CH_pso_575 3 5 0.000287656
Rhododendron simsii chr01 4 CH_rsi_303 3 3 0.0000110626
Rhododendron simsii chr04 4 CH_rsi_58 7 9 5.01632e-17
Striga asiatica scaffold74 4 CH_sas_14 4 8 0.0000000254025
Salvia bowleyana GWHASIU00000004 4 CH_sbo_110 5 10 0.000000000272064
Salvia bowleyana GWHASIU00000002 4 CH_sbo_121 5 13 0.00000000138795
Salvia bowleyana GWHASIU00000005 4 CH_sbo_260 3 3 0.00000549925
Simmondsia chinensis GWHAASQ00000007 4 CH_sci_24 4 4 0.000000000129633
Sechium edule LG03 4 CH_sed_141 3 3 0.0000135212
Sechium edule LG05 4 CH_sed_142 3 3 0.0000135212
Solanum lycopersicum SL4.0ch03 4 CH_sly_529 3 4 0.000572303
Solanum tuberosum ST4.03ch01 4 CH_stu_330 6 42 0.0000171261
Solanum tuberosum ST4.03ch10 4 CH_stu_74 7 8 0.0000000000000562367
Trochodendron aralioides group17 4 CH_tar_235 3 3 0.0000243034
Trochodendron aralioides group15 4 CH_tar_93 4 4 0.0000000204285
Theobroma cacao Chromosome_5 4 CH_tca_211 3 3 0.00000547137
Tarenaya hassleriana NW_010970490.1 4 CH_tha_43 4 4 0.0000000418356
Vaccinium macrocarpon chr10_Vaccinium_macrocarpon_Stevens_v1 4 CH_vma_108 3 3 0.000000129529
Vitis vinifera chr16 4 CH_vvi_93 4 7 0.000000000231015
Zea mays 5 4 CH_zma_311 3 6 0.000512368

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001