Functional clusters
Information
- Type Gene Ontology
- Description cadmium ion binding
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Aethionema arabicum | LG-2 | 3 | CH_aar_264 | 2 | 2 | 0.000912326 |
| Actinidia chinensis | Lachesis_group23 | 3 | CH_ach_229 | 2 | 2 | 0.000543213 |
| Arabidopsis lyrata | scaffold_5 | 3 | CH_aly_42 | 4 | 4 | 0.0000000000603923 |
| Arabidopsis thaliana | Chr2 | 3 | CH_ath_57 | 5 | 19 | 0.00000000000739684 |
| Cardamine hirsuta | Chr5 | 3 | CH_chi_16 | 7 | 7 | 2.83549e-21 |
| Carya illinoinensis | Chr04 | 3 | CH_cil_455 | 2 | 2 | 0.000371897 |
| Cucumis melo | chr09 | 3 | CH_cme_270 | 2 | 2 | 0.000667111 |
| Capsella rubella | scaffold_5 | 3 | CH_cru_31 | 5 | 6 | 0.000000000000162049 |
| Lonicera japonica | GWHAAZE00000002 | 3 | CH_lonja_249 | 3 | 6 | 0.000000430325 |
| Medicago truncatula | chr8 | 3 | CH_mtr_319 | 3 | 3 | 0.000000303862 |
| Oryza sativa ssp. japonica | chr12 | 3 | CH_osa_42 | 6 | 25 | 0.00000000000150842 |
| Rosa chinensis | RcHm_v2.0_Chr4 | 3 | CH_rch_140 | 5 | 10 | 0.00000000000613958 |
| Rhododendron simsii | chr13 | 3 | CH_rsi_482 | 2 | 3 | 0.000580745 |
| Aethionema arabicum | LG-2 | 4 | CH_aar_264 | 2 | 2 | 0.000912326 |
| Actinidia chinensis | Lachesis_group23 | 4 | CH_ach_229 | 2 | 2 | 0.000543213 |
| Arabidopsis lyrata | scaffold_5 | 4 | CH_aly_42 | 4 | 4 | 0.0000000000603923 |
| Arabidopsis thaliana | Chr2 | 4 | CH_ath_57 | 5 | 19 | 0.00000000000739684 |
| Cardamine hirsuta | Chr5 | 4 | CH_chi_16 | 7 | 7 | 2.83549e-21 |
| Carya illinoinensis | Chr04 | 4 | CH_cil_455 | 2 | 2 | 0.000371897 |
| Cucumis melo | chr09 | 4 | CH_cme_270 | 2 | 2 | 0.000667111 |
| Capsella rubella | scaffold_5 | 4 | CH_cru_31 | 5 | 6 | 0.000000000000162049 |
| Lonicera japonica | GWHAAZE00000002 | 4 | CH_lonja_249 | 3 | 6 | 0.000000430325 |
| Medicago truncatula | chr8 | 4 | CH_mtr_319 | 3 | 3 | 0.000000303862 |
| Oryza sativa ssp. japonica | chr12 | 4 | CH_osa_42 | 6 | 25 | 0.00000000000150842 |
| Rosa chinensis | RcHm_v2.0_Chr4 | 4 | CH_rch_140 | 5 | 10 | 0.00000000000613958 |
| Rhododendron simsii | chr13 | 4 | CH_rsi_482 | 2 | 3 | 0.000580745 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |