Functional clusters
Information
- Type Gene Ontology
- Description transport of virus in host, tissue to tissue
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Aethionema arabicum | LG-10 | 3 | CH_aar_99 | 3 | 4 | 0.00000174767 |
| Camellia sinensis var. sinensis | Chr5 | 3 | CH_camsi_429 | 3 | 11 | 0.0000104022 |
| Capsicum annuum | PGAv.1.6.scaffold749 | 3 | CH_can_121 | 4 | 7 | 0.00000000745504 |
| Cucumis sativus L. | chr1 | 3 | CH_csa_118 | 3 | 4 | 0.000000836109 |
| Daucus carota | DCARv2_Chr8 | 3 | CH_dca_131 | 3 | 3 | 0.000000341687 |
| Davidia involucrata | GWHABJS00000016 | 3 | CH_din_187 | 3 | 5 | 0.00000618858 |
| Erigeron canadensis | Conyza_canadensis_scaffold:1 | 3 | CH_eca_366 | 2 | 2 | 0.000269233 |
| Gossypium hirsutum | A08 | 3 | CH_ghi_288 | 3 | 3 | 0.00000164699 |
| Gossypium hirsutum | D08 | 3 | CH_ghi_342 | 3 | 4 | 0.00000658662 |
| Gossypium raimondii | Chr04 | 3 | CH_gra_164 | 3 | 4 | 0.00000379313 |
| Hydrangea macrophylla | Hma1.2p1_0218F.1 | 3 | CH_hma_306 | 2 | 2 | 0.000666519 |
| Lactuca sativa | Lsat_1_v8_lg_6 | 3 | CH_lsa_180 | 3 | 3 | 0.0000000792629 |
| Nicotiana tabacum | Nitab4.5_0000941 | 3 | CH_nta_131 | 2 | 4 | 0.000658292 |
| Olea europaea | chr3 | 3 | CH_oeu_98 | 3 | 5 | 0.00000149561 |
| Punica granatum | NC_045128.1 | 3 | CH_pgr_77 | 4 | 4 | 0.0000000000887301 |
| Pisum sativum | chr4LG4 | 3 | CH_psa_359 | 2 | 2 | 0.000521635 |
| Quercus lobata | 4 | 3 | CH_qlo_907 | 2 | 2 | 0.000309773 |
| Solanum lycopersicum | SL4.0ch09 | 3 | CH_sly_181 | 3 | 3 | 0.000000289388 |
| Solanum pennellii | Spenn-ch09 | 3 | CH_spe_141 | 3 | 3 | 0.000000166188 |
| Trochodendron aralioides | group1 | 3 | CH_tar_2 | 12 | 20 | 6.66092e-33 |
| Aethionema arabicum | LG-10 | 4 | CH_aar_99 | 3 | 4 | 0.00000174767 |
| Camellia sinensis var. sinensis | Chr5 | 4 | CH_camsi_429 | 3 | 11 | 0.0000104022 |
| Capsicum annuum | PGAv.1.6.scaffold749 | 4 | CH_can_121 | 4 | 7 | 0.00000000745504 |
| Cucumis sativus L. | chr1 | 4 | CH_csa_118 | 3 | 4 | 0.000000836109 |
| Daucus carota | DCARv2_Chr8 | 4 | CH_dca_131 | 3 | 3 | 0.000000341687 |
| Davidia involucrata | GWHABJS00000016 | 4 | CH_din_187 | 3 | 5 | 0.00000618858 |
| Erigeron canadensis | Conyza_canadensis_scaffold:1 | 4 | CH_eca_366 | 2 | 2 | 0.000269233 |
| Gossypium hirsutum | A08 | 4 | CH_ghi_288 | 3 | 3 | 0.00000164699 |
| Gossypium hirsutum | D08 | 4 | CH_ghi_342 | 3 | 4 | 0.00000658662 |
| Gossypium raimondii | Chr04 | 4 | CH_gra_164 | 3 | 4 | 0.00000379313 |
| Hydrangea macrophylla | Hma1.2p1_0218F.1 | 4 | CH_hma_306 | 2 | 2 | 0.000666519 |
| Lactuca sativa | Lsat_1_v8_lg_6 | 4 | CH_lsa_180 | 3 | 3 | 0.0000000792629 |
| Nicotiana tabacum | Nitab4.5_0000941 | 4 | CH_nta_131 | 2 | 4 | 0.000658292 |
| Olea europaea | chr3 | 4 | CH_oeu_98 | 3 | 5 | 0.00000149561 |
| Punica granatum | NC_045128.1 | 4 | CH_pgr_77 | 4 | 4 | 0.0000000000887301 |
| Pisum sativum | chr4LG4 | 4 | CH_psa_359 | 2 | 2 | 0.000521635 |
| Quercus lobata | 4 | 4 | CH_qlo_907 | 2 | 2 | 0.000309773 |
| Solanum lycopersicum | SL4.0ch09 | 4 | CH_sly_181 | 3 | 3 | 0.000000289388 |
| Solanum pennellii | Spenn-ch09 | 4 | CH_spe_141 | 3 | 3 | 0.000000166188 |
| Trochodendron aralioides | group1 | 4 | CH_tar_2 | 12 | 20 | 6.66092e-33 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |