Functional clusters
Information
- Type Gene Ontology
- Description violaxanthin de-epoxidase activity
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Corylus avellana | 2 | 3 | CH_cav_212 | 3 | 11 | 0.0000290693 |
| Cardamine hirsuta | Chr4 | 3 | CH_chi_343 | 2 | 2 | 0.000414723 |
| Glycine max | Gm08 | 3 | CH_gma_439 | 2 | 2 | 0.000379557 |
| Rosa chinensis | RcHm_v2.0_Chr2 | 3 | CH_rch_305 | 3 | 7 | 0.0000003337 |
| Solanum tuberosum | ST4.03ch04 | 3 | CH_stu_350 | 3 | 12 | 0.000030304 |
| Solanum tuberosum | ST4.03ch04 | 3 | CH_stu_498 | 3 | 22 | 0.000211911 |
| Utricularia gibba | unitig_46 | 3 | CH_ugi_106 | 2 | 2 | 0.000246144 |
| Corylus avellana | 2 | 4 | CH_cav_212 | 3 | 11 | 0.0000290693 |
| Cardamine hirsuta | Chr4 | 4 | CH_chi_343 | 2 | 2 | 0.000414723 |
| Glycine max | Gm08 | 4 | CH_gma_439 | 2 | 2 | 0.000379557 |
| Rosa chinensis | RcHm_v2.0_Chr2 | 4 | CH_rch_305 | 3 | 7 | 0.0000003337 |
| Solanum tuberosum | ST4.03ch04 | 4 | CH_stu_350 | 3 | 12 | 0.000030304 |
| Solanum tuberosum | ST4.03ch04 | 4 | CH_stu_498 | 3 | 22 | 0.000211911 |
| Utricularia gibba | unitig_46 | 4 | CH_ugi_106 | 2 | 2 | 0.000246144 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |