Functional clusters

Information

  • Type Gene Ontology
  • Description pigment biosynthetic process

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Citrus clementina scaffold_4 3 CH_ccl_379 8 79 0.000434612
Citrus clementina scaffold_4 4 CH_ccl_379 8 79 0.000434612

Available child term results

Ontology identifier Description Number of clusters
GO:0006784 heme A biosynthetic process 22
GO:0009718 anthocyanin-containing compound biosynthetic process 4
GO:0015995 chlorophyll biosynthetic process 4
GO:0016123 xanthophyll biosynthetic process 2
GO:0019354 siroheme biosynthetic process 2
GO:0031540 regulation of anthocyanin biosynthetic process 8
GO:0031542 positive regulation of anthocyanin biosynthetic process 2
GO:0033511 luteolin biosynthetic process 8
GO:0051555 flavonol biosynthetic process 4
GO:0070455 positive regulation of heme biosynthetic process 4
GO:1900384 regulation of flavonol biosynthetic process 4
GO:1900386 positive regulation of flavonol biosynthetic process 4
GO:1904143 positive regulation of carotenoid biosynthetic process 4

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001