Functional clusters

Information

  • Type Gene Ontology
  • Description ATP metabolic process

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Aethionema arabicum LG-5 3 CH_aar_145 5 16 0.000076387
Aquilegia oxysepala CHR01 3 CH_aox_312 3 3 0.000952951
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.01 3 CH_arhy_475 4 5 0.0000690499
Capsicum annuum PGAv.1.6.scaffold386 3 CH_can_109 8 19 0.00000000210386
Capsicum annuum PGAv.1.6.scaffold1001 3 CH_can_208 5 7 0.00000337413
Erigeron canadensis Conyza_canadensis_unscaffolded:263 3 CH_eca_140 6 20 0.000000330394
Nelumbo nucifera chr1 3 CH_nnu_138 9 80 0.00000310336
Nicotiana tabacum Nitab4.5_0001152 3 CH_nta_148 5 16 0.000720045
Nicotiana tabacum Nitab4.5_0002418 3 CH_nta_59 6 16 0.00000807427
Solanum pennellii Spenn-ch00 3 CH_spe_451 3 3 0.000732726
Vanilla planifolia CM028152.1 3 CH_vpl_24 7 9 0.00000000000974314
Aethionema arabicum LG-5 4 CH_aar_145 5 16 0.000076387
Aquilegia oxysepala CHR01 4 CH_aox_312 3 3 0.000952951
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.01 4 CH_arhy_475 4 5 0.0000690499
Capsicum annuum PGAv.1.6.scaffold386 4 CH_can_109 8 19 0.00000000210386
Capsicum annuum PGAv.1.6.scaffold1001 4 CH_can_208 5 7 0.00000337413
Erigeron canadensis Conyza_canadensis_unscaffolded:263 4 CH_eca_140 6 20 0.000000330394
Nelumbo nucifera chr1 4 CH_nnu_138 9 80 0.00000310336
Nicotiana tabacum Nitab4.5_0001152 4 CH_nta_148 5 16 0.000720045
Nicotiana tabacum Nitab4.5_0002418 4 CH_nta_59 6 16 0.00000807427
Solanum pennellii Spenn-ch00 4 CH_spe_451 3 3 0.000732726
Vanilla planifolia CM028152.1 4 CH_vpl_24 7 9 0.00000000000974314

Available child term results

Ontology identifier Description Number of clusters
GO:0006096 glycolytic process 20
GO:0006110 regulation of glycolytic process 2
GO:0006119 oxidative phosphorylation 6
GO:0006120 mitochondrial electron transport, NADH to ubiquinone 4
GO:0006121 mitochondrial electron transport, succinate to ubiquinone 2
GO:0006122 mitochondrial electron transport, ubiquinol to cytochrome c 8
GO:0006123 mitochondrial electron transport, cytochrome c to oxygen 22
GO:0015986 ATP synthesis coupled proton transport 22
GO:0042773 ATP synthesis coupled electron transport 8
GO:0042775 mitochondrial ATP synthesis coupled electron transport 4
GO:1903578 regulation of ATP metabolic process 6

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001