Functional clusters

Information

  • Type Gene Ontology
  • Description pH reduction

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr1 3 CH_acertr_425 2 4 0.000422952
Actinidia chinensis Lachesis_group1 3 CH_ach_197 2 4 0.00032591
Davidia involucrata GWHABJS00000006 3 CH_din_347 2 3 0.000450094
Glycine max Gm03 3 CH_gma_276 2 2 0.0000379557
Malus domestica Chr17 3 CH_mdo_228 3 5 0.000000215686
Manihot esculenta Chromosome04 3 CH_mes_390 2 3 0.00054954
Oryza sativa ssp. japonica chr02 3 CH_osa_10 8 12 8.84495e-23
Phaseolus vulgaris Chr09 3 CH_pvu_317 2 4 0.000440804
Quercus lobata 5 3 CH_qlo_726 2 2 0.0000516289
Tripterygium wilfordii NC_052249.1 3 CH_twi_270 2 2 0.000334728
Vitis vinifera chr9 3 CH_vvi_309 2 3 0.00022818
Acer truncatum chr1 4 CH_acertr_425 2 4 0.000422952
Actinidia chinensis Lachesis_group1 4 CH_ach_197 2 4 0.00032591
Davidia involucrata GWHABJS00000006 4 CH_din_347 2 3 0.000450094
Glycine max Gm03 4 CH_gma_276 2 2 0.0000379557
Malus domestica Chr17 4 CH_mdo_228 3 5 0.000000215686
Manihot esculenta Chromosome04 4 CH_mes_390 2 3 0.00054954
Oryza sativa ssp. japonica chr02 4 CH_osa_10 8 12 8.84495e-23
Phaseolus vulgaris Chr09 4 CH_pvu_317 2 4 0.000440804
Quercus lobata 5 4 CH_qlo_726 2 2 0.0000516289
Tripterygium wilfordii NC_052249.1 4 CH_twi_270 2 2 0.000334728
Vitis vinifera chr9 4 CH_vvi_309 2 3 0.00022818

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001