Functional clusters

Information

  • Type Gene Ontology
  • Description regulation of cell differentiation

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Solanum lycopersicum SL4.0ch03 3 CH_sly_295 3 3 0.0000169292
Solanum pennellii Spenn-ch03 3 CH_spe_231 3 3 0.0000133396
Solanum tuberosum ST4.03ch03 3 CH_stu_308 3 3 0.0000090602
Solanum lycopersicum SL4.0ch03 4 CH_sly_295 3 3 0.0000169292
Solanum pennellii Spenn-ch03 4 CH_spe_231 3 3 0.0000133396
Solanum tuberosum ST4.03ch03 4 CH_stu_308 3 3 0.0000090602

Available child term results

Ontology identifier Description Number of clusters
GO:0010063 positive regulation of trichoblast fate specification 2
GO:0010455 positive regulation of cell fate commitment 2
GO:0045604 regulation of epidermal cell differentiation 6
GO:0045691 regulation of embryo sac central cell differentiation 4
GO:0045694 regulation of embryo sac egg cell differentiation 2
GO:0048505 regulation of timing of cell differentiation 2
GO:1900032 regulation of trichome patterning 4
GO:1902892 positive regulation of root hair elongation 2
GO:1903224 regulation of endodermal cell differentiation 2

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001