Functional clusters
Information
- Type Gene Ontology
- Description response to ethanol
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Acer truncatum | chr2 | 3 | CH_acertr_191 | 3 | 4 | 0.00000166964 |
| Acer truncatum | chr3 | 3 | CH_acertr_69 | 4 | 6 | 0.00000000110342 |
| Capsicum annuum | PGAv.1.6.scaffold606 | 3 | CH_can_180 | 3 | 4 | 0.000000409444 |
| Cicer arietinum L. | Ca_LG6_v3 | 3 | CH_car_38 | 3 | 3 | 0.000000181733 |
| Chara braunii | BFEA01000396 | 3 | CH_cbr_162 | 2 | 2 | 0.000431562 |
| Coffea canephora | chr2 | 3 | CH_ccan_265 | 2 | 5 | 0.000127766 |
| Carica papaya | supercontig_81 | 3 | CH_cpa_25 | 4 | 5 | 0.000000000451053 |
| Chlamydomonas reinhardtii | chromosome_7 | 3 | CH_cre_30 | 3 | 6 | 0.00000155186 |
| Daucus carota | DCARv2_Chr3 | 3 | CH_dca_36 | 5 | 9 | 0.000000000000875347 |
| Erigeron canadensis | Conyza_canadensis_scaffold:6 | 3 | CH_eca_89 | 3 | 3 | 0.0000000120814 |
| Helianthus annuus | HanXRQChr01 | 3 | CH_han_89 | 5 | 11 | 0.000000000000973157 |
| Hydrangea macrophylla | Hma1.2p1_0039F.1 | 3 | CH_hma_190 | 2 | 4 | 0.000111086 |
| Lupinus albus | Lalb_Chr15 | 3 | CH_lal_337 | 2 | 2 | 0.000314895 |
| Lactuca sativa | Lsat_1_v8_lg_2 | 3 | CH_lsa_105 | 4 | 7 | 0.000000000213862 |
| Manihot esculenta | Chromosome14 | 3 | CH_mes_54 | 6 | 10 | 8.42196e-16 |
| Marchantia polymorpha | scaffold_76 | 3 | CH_mpo_12 | 5 | 5 | 0.000000000000884041 |
| Oryza sativa ssp. japonica | chr03 | 3 | CH_osa_81 | 4 | 6 | 0.000000000231975 |
| Physcomitrium patens | Chr08 | 3 | CH_ppa_65 | 4 | 21 | 0.00000560971 |
| Papaver somniferum | NC_039368.1 | 3 | CH_pso_159 | 5 | 19 | 0.000000000754168 |
| Populus trichocarpa | Chr08 | 3 | CH_ptr_456 | 2 | 2 | 0.000867002 |
| Phaseolus vulgaris | Chr02 | 3 | CH_pvu_46 | 5 | 5 | 0.0000000000000122419 |
| Quercus lobata | 8 | 3 | CH_qlo_195 | 5 | 8 | 0.000000000000751821 |
| Simmondsia chinensis | GWHAASQ00000010 | 3 | CH_sci_94 | 3 | 5 | 0.00000217427 |
| Sequoiadendron giganteum | chr5 | 3 | CH_sgi_94 | 10 | 40 | 7.40535e-23 |
| Trifolium pratense | Tp57577_TGAC_v2_scaf_259 | 3 | CH_tpr_128 | 3 | 7 | 0.00000300727 |
| Acer truncatum | chr2 | 4 | CH_acertr_191 | 3 | 4 | 0.00000166964 |
| Acer truncatum | chr3 | 4 | CH_acertr_69 | 4 | 6 | 0.00000000110342 |
| Capsicum annuum | PGAv.1.6.scaffold606 | 4 | CH_can_180 | 3 | 4 | 0.000000409444 |
| Cicer arietinum L. | Ca_LG6_v3 | 4 | CH_car_38 | 3 | 3 | 0.000000181733 |
| Chara braunii | BFEA01000396 | 4 | CH_cbr_162 | 2 | 2 | 0.000431562 |
| Coffea canephora | chr2 | 4 | CH_ccan_265 | 2 | 5 | 0.000127766 |
| Carica papaya | supercontig_81 | 4 | CH_cpa_25 | 4 | 5 | 0.000000000451053 |
| Chlamydomonas reinhardtii | chromosome_7 | 4 | CH_cre_30 | 3 | 6 | 0.00000155186 |
| Daucus carota | DCARv2_Chr3 | 4 | CH_dca_36 | 5 | 9 | 0.000000000000875347 |
| Erigeron canadensis | Conyza_canadensis_scaffold:6 | 4 | CH_eca_89 | 3 | 3 | 0.0000000120814 |
| Helianthus annuus | HanXRQChr01 | 4 | CH_han_89 | 5 | 11 | 0.000000000000973157 |
| Hydrangea macrophylla | Hma1.2p1_0039F.1 | 4 | CH_hma_190 | 2 | 4 | 0.000111086 |
| Lupinus albus | Lalb_Chr15 | 4 | CH_lal_337 | 2 | 2 | 0.000314895 |
| Lactuca sativa | Lsat_1_v8_lg_2 | 4 | CH_lsa_105 | 4 | 7 | 0.000000000213862 |
| Manihot esculenta | Chromosome14 | 4 | CH_mes_54 | 6 | 10 | 8.42196e-16 |
| Marchantia polymorpha | scaffold_76 | 4 | CH_mpo_12 | 5 | 5 | 0.000000000000884041 |
| Oryza sativa ssp. japonica | chr03 | 4 | CH_osa_81 | 4 | 6 | 0.000000000231975 |
| Physcomitrium patens | Chr08 | 4 | CH_ppa_65 | 4 | 21 | 0.00000560971 |
| Papaver somniferum | NC_039368.1 | 4 | CH_pso_159 | 5 | 19 | 0.000000000754168 |
| Populus trichocarpa | Chr08 | 4 | CH_ptr_456 | 2 | 2 | 0.000867002 |
| Phaseolus vulgaris | Chr02 | 4 | CH_pvu_46 | 5 | 5 | 0.0000000000000122419 |
| Quercus lobata | 8 | 4 | CH_qlo_195 | 5 | 8 | 0.000000000000751821 |
| Simmondsia chinensis | GWHAASQ00000010 | 4 | CH_sci_94 | 3 | 5 | 0.00000217427 |
| Sequoiadendron giganteum | chr5 | 4 | CH_sgi_94 | 10 | 40 | 7.40535e-23 |
| Trifolium pratense | Tp57577_TGAC_v2_scaf_259 | 4 | CH_tpr_128 | 3 | 7 | 0.00000300727 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |