Functional clusters
Information
- Type Gene Ontology
- Description acyl-[acyl-carrier-protein] desaturase activity
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Actinidia chinensis | Lachesis_group8 | 3 | CH_ach_45 | 3 | 3 | 0.000000154921 |
| Arabidopsis lyrata | scaffold_6 | 3 | CH_aly_366 | 2 | 2 | 0.000990066 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.08 | 3 | CH_arhy_337 | 3 | 4 | 0.000001183 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.17 | 3 | CH_arhy_372 | 3 | 5 | 0.00000295716 |
| Amborella trichopoda | AmTr_v1.0_scaffold00001 | 3 | CH_atr_113 | 3 | 4 | 0.000000378627 |
| Brassica rapa | A10 | 3 | CH_bra_286 | 2 | 2 | 0.00064397 |
| Cannabis sativa | NC_044370.1 | 3 | CH_cansat_181 | 3 | 8 | 0.0000303975 |
| Corylus avellana | 9 | 3 | CH_cav_25 | 7 | 19 | 6.37108e-16 |
| Carpinus fangiana | Cfa03 | 3 | CH_cfa_14 | 8 | 12 | 1.10313e-21 |
| Cardamine hirsuta | Chr6 | 3 | CH_chi_375 | 2 | 2 | 0.000691204 |
| Chenopodium quinoa | C_Quinoa_Scaffold_2187 | 3 | CH_cqu_44 | 5 | 5 | 0.0000000000000299438 |
| Chenopodium quinoa | C_Quinoa_Scaffold_4480 | 3 | CH_cqu_71 | 5 | 13 | 0.0000000000384878 |
| Eucalyptus grandis | Chr08 | 3 | CH_egr_18 | 11 | 13 | 6.26988e-33 |
| Eucalyptus grandis | Chr11 | 3 | CH_egr_554 | 3 | 3 | 0.00000287747 |
| Gossypium hirsutum | A10 | 3 | CH_ghi_274 | 3 | 3 | 0.00000103632 |
| Gossypium hirsutum | D10 | 3 | CH_ghi_318 | 3 | 4 | 0.00000414456 |
| Gossypium raimondii | Chr11 | 3 | CH_gra_163 | 3 | 5 | 0.0000036204 |
| Lupinus albus | Lalb_Chr11 | 3 | CH_lal_403 | 2 | 2 | 0.000787236 |
| Lonicera japonica | GWHAAZE00000006 | 3 | CH_lonja_109 | 6 | 26 | 0.000000000000334582 |
| Medicago truncatula | chr3 | 3 | CH_mtr_52 | 7 | 27 | 4.03209e-17 |
| Nicotiana tabacum | Nitab4.5_0000270 | 3 | CH_nta_114 | 2 | 2 | 0.000329182 |
| Populus trichocarpa | Chr10 | 3 | CH_ptr_449 | 2 | 2 | 0.000867002 |
| Rhododendron simsii | chr09 | 3 | CH_rsi_72 | 5 | 5 | 0.0000000000000163901 |
| Salix brachista | GWHAAZH00000010 | 3 | CH_sbr_56 | 4 | 4 | 0.0000000000112607 |
| Solanum lycopersicum | SL4.0ch06 | 3 | CH_sly_100 | 4 | 5 | 0.000000000382137 |
| Selaginella moellendorffii | scaffold_37 | 3 | CH_smo_6 | 6 | 6 | 2.74129e-16 |
| Solanum pennellii | Spenn-ch06 | 3 | CH_spe_67 | 4 | 5 | 0.000000000166306 |
| Solanum tuberosum | ST4.03ch06 | 3 | CH_stu_78 | 5 | 6 | 0.000000000000143374 |
| Selenicereus undatus | Scaffold_33676 | 3 | CH_sun_232 | 2 | 2 | 0.000726639 |
| Theobroma cacao | Chromosome_4 | 3 | CH_tca_79 | 4 | 4 | 0.000000000148511 |
| Utricularia gibba | unitig_8 | 3 | CH_ugi_24 | 3 | 3 | 0.000000100982 |
| Vanilla planifolia | CM028152.1 | 3 | CH_vpl_366 | 3 | 23 | 0.000809351 |
| Vitis vinifera | chr5 | 3 | CH_vvi_39 | 7 | 16 | 5.75187e-17 |
| Actinidia chinensis | Lachesis_group8 | 4 | CH_ach_45 | 3 | 3 | 0.000000154921 |
| Arabidopsis lyrata | scaffold_6 | 4 | CH_aly_366 | 2 | 2 | 0.000990066 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.08 | 4 | CH_arhy_337 | 3 | 4 | 0.000001183 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.17 | 4 | CH_arhy_372 | 3 | 5 | 0.00000295716 |
| Amborella trichopoda | AmTr_v1.0_scaffold00001 | 4 | CH_atr_113 | 3 | 4 | 0.000000378627 |
| Brassica rapa | A10 | 4 | CH_bra_286 | 2 | 2 | 0.00064397 |
| Cannabis sativa | NC_044370.1 | 4 | CH_cansat_181 | 3 | 8 | 0.0000303975 |
| Corylus avellana | 9 | 4 | CH_cav_25 | 7 | 19 | 6.37108e-16 |
| Carpinus fangiana | Cfa03 | 4 | CH_cfa_14 | 8 | 12 | 1.10313e-21 |
| Cardamine hirsuta | Chr6 | 4 | CH_chi_375 | 2 | 2 | 0.000691204 |
| Chenopodium quinoa | C_Quinoa_Scaffold_2187 | 4 | CH_cqu_44 | 5 | 5 | 0.0000000000000299438 |
| Chenopodium quinoa | C_Quinoa_Scaffold_4480 | 4 | CH_cqu_71 | 5 | 13 | 0.0000000000384878 |
| Eucalyptus grandis | Chr08 | 4 | CH_egr_18 | 11 | 13 | 6.26988e-33 |
| Eucalyptus grandis | Chr11 | 4 | CH_egr_554 | 3 | 3 | 0.00000287747 |
| Gossypium hirsutum | A10 | 4 | CH_ghi_274 | 3 | 3 | 0.00000103632 |
| Gossypium hirsutum | D10 | 4 | CH_ghi_318 | 3 | 4 | 0.00000414456 |
| Gossypium raimondii | Chr11 | 4 | CH_gra_163 | 3 | 5 | 0.0000036204 |
| Lupinus albus | Lalb_Chr11 | 4 | CH_lal_403 | 2 | 2 | 0.000787236 |
| Lonicera japonica | GWHAAZE00000006 | 4 | CH_lonja_109 | 6 | 26 | 0.000000000000334582 |
| Medicago truncatula | chr3 | 4 | CH_mtr_52 | 7 | 27 | 4.03209e-17 |
| Nicotiana tabacum | Nitab4.5_0000270 | 4 | CH_nta_114 | 2 | 2 | 0.000329182 |
| Populus trichocarpa | Chr10 | 4 | CH_ptr_449 | 2 | 2 | 0.000867002 |
| Rhododendron simsii | chr09 | 4 | CH_rsi_72 | 5 | 5 | 0.0000000000000163901 |
| Salix brachista | GWHAAZH00000010 | 4 | CH_sbr_56 | 4 | 4 | 0.0000000000112607 |
| Solanum lycopersicum | SL4.0ch06 | 4 | CH_sly_100 | 4 | 5 | 0.000000000382137 |
| Selaginella moellendorffii | scaffold_37 | 4 | CH_smo_6 | 6 | 6 | 2.74129e-16 |
| Solanum pennellii | Spenn-ch06 | 4 | CH_spe_67 | 4 | 5 | 0.000000000166306 |
| Solanum tuberosum | ST4.03ch06 | 4 | CH_stu_78 | 5 | 6 | 0.000000000000143374 |
| Selenicereus undatus | Scaffold_33676 | 4 | CH_sun_232 | 2 | 2 | 0.000726639 |
| Theobroma cacao | Chromosome_4 | 4 | CH_tca_79 | 4 | 4 | 0.000000000148511 |
| Utricularia gibba | unitig_8 | 4 | CH_ugi_24 | 3 | 3 | 0.000000100982 |
| Vanilla planifolia | CM028152.1 | 4 | CH_vpl_366 | 3 | 23 | 0.000809351 |
| Vitis vinifera | chr5 | 4 | CH_vvi_39 | 7 | 16 | 5.75187e-17 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |