Functional clusters

Information

  • Type Gene Ontology
  • Description T/G mismatch-specific endonuclease activity

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr10 3 CH_acertr_372 2 2 0.000211491
Aquilegia oxysepala CHR06 3 CH_aox_262 2 2 0.000481193
Arabidopsis thaliana Chr4 3 CH_ath_168 3 6 0.00000024621
Brassica oleracea C3 3 CH_bol_109 3 3 0.0000000897457
Brassica oleracea C1 3 CH_bol_396 2 2 0.000915212
Brassica rapa A01 3 CH_bra_284 2 2 0.00064397
Cannabis sativa NC_044371.1 3 CH_cansat_111 3 4 0.00000010348
Capsicum annuum PGAv.1.6.scaffold1181 3 CH_can_370 2 2 0.000247831
Coffea canephora chr2 3 CH_ccan_340 2 5 0.000425883
Citrus clementina scaffold_2 3 CH_ccl_192 3 5 0.000000403705
Cardamine hirsuta Chr7 3 CH_chi_330 2 2 0.000414723
Carica papaya supercontig_27 3 CH_cpa_151 2 2 0.0000950661
Capsella rubella scaffold_7 3 CH_cru_115 3 3 0.000000080191
Daucus carota DCARv2_Chr8 3 CH_dca_126 3 4 0.000000244043
Durio zibethinus NW_019167982.1 3 CH_dzi_299 2 2 0.000463489
Erythranthe guttata scaffold_13 3 CH_egut_368 2 2 0.000436888
Eutrema salsugineum scaffold_1 3 CH_esa_74 3 3 0.0000000869853
Fragaria vesca Fvb3 3 CH_fve_290 2 2 0.00017673
Lupinus albus Lalb_Chr09 3 CH_lal_284 2 2 0.000157447
Malus domestica Chr05 3 CH_mdo_639 2 2 0.000568817
Nelumbo nucifera chr1 3 CH_nnu_223 2 2 0.000144505
Oryza sativa ssp. japonica chr01 3 CH_osa_384 2 3 0.000316874
Punica granatum NC_045131.1 3 CH_pgr_316 2 2 0.000225107
Prunus persica Pp04 3 CH_ppe_381 2 2 0.000223789
Papaver somniferum NC_039358.1 3 CH_pso_217 3 3 0.0000000266479
Populus trichocarpa Chr11 3 CH_ptr_357 2 2 0.0001734
Quercus lobata 5 3 CH_qlo_890 2 2 0.000309773
Solanum lycopersicum SL4.0ch02 3 CH_sly_419 2 2 0.000176082
Solanum pennellii Spenn-ch02 3 CH_spe_336 2 2 0.000133437
Selenicereus undatus Scaffold_33680 3 CH_sun_145 2 2 0.000217992
Theobroma cacao Chromosome_6 3 CH_tca_321 2 2 0.000219716
Tripterygium wilfordii NC_052240.1 3 CH_twi_86 3 3 0.0000000186743
Vitis vinifera chrUn 3 CH_vvi_323 2 2 0.000228189
Acer truncatum chr10 4 CH_acertr_372 2 2 0.000211491
Aquilegia oxysepala CHR06 4 CH_aox_262 2 2 0.000481193
Arabidopsis thaliana Chr4 4 CH_ath_168 3 6 0.00000024621
Brassica oleracea C3 4 CH_bol_109 3 3 0.0000000897457
Brassica oleracea C1 4 CH_bol_396 2 2 0.000915212
Brassica rapa A01 4 CH_bra_284 2 2 0.00064397
Cannabis sativa NC_044371.1 4 CH_cansat_111 3 4 0.00000010348
Capsicum annuum PGAv.1.6.scaffold1181 4 CH_can_370 2 2 0.000247831
Coffea canephora chr2 4 CH_ccan_340 2 5 0.000425883
Citrus clementina scaffold_2 4 CH_ccl_192 3 5 0.000000403705
Cardamine hirsuta Chr7 4 CH_chi_330 2 2 0.000414723
Carica papaya supercontig_27 4 CH_cpa_151 2 2 0.0000950661
Capsella rubella scaffold_7 4 CH_cru_115 3 3 0.000000080191
Daucus carota DCARv2_Chr8 4 CH_dca_126 3 4 0.000000244043
Durio zibethinus NW_019167982.1 4 CH_dzi_299 2 2 0.000463489
Erythranthe guttata scaffold_13 4 CH_egut_368 2 2 0.000436888
Eutrema salsugineum scaffold_1 4 CH_esa_74 3 3 0.0000000869853
Fragaria vesca Fvb3 4 CH_fve_290 2 2 0.00017673
Lupinus albus Lalb_Chr09 4 CH_lal_284 2 2 0.000157447
Malus domestica Chr05 4 CH_mdo_639 2 2 0.000568817
Nelumbo nucifera chr1 4 CH_nnu_223 2 2 0.000144505
Oryza sativa ssp. japonica chr01 4 CH_osa_384 2 3 0.000316874
Punica granatum NC_045131.1 4 CH_pgr_316 2 2 0.000225107
Prunus persica Pp04 4 CH_ppe_381 2 2 0.000223789
Papaver somniferum NC_039358.1 4 CH_pso_217 3 3 0.0000000266479
Populus trichocarpa Chr11 4 CH_ptr_357 2 2 0.0001734
Quercus lobata 5 4 CH_qlo_890 2 2 0.000309773
Solanum lycopersicum SL4.0ch02 4 CH_sly_419 2 2 0.000176082
Solanum pennellii Spenn-ch02 4 CH_spe_336 2 2 0.000133437
Selenicereus undatus Scaffold_33680 4 CH_sun_145 2 2 0.000217992
Theobroma cacao Chromosome_6 4 CH_tca_321 2 2 0.000219716
Tripterygium wilfordii NC_052240.1 4 CH_twi_86 3 3 0.0000000186743
Vitis vinifera chrUn 4 CH_vvi_323 2 2 0.000228189

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001