Functional clusters
Information
- Type Gene Ontology
- Description proteoglycan binding
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Eucalyptus grandis | Chr06 | 3 | CH_egr_876 | 2 | 6 | 0.000877809 |
| Punica granatum | NC_045130.1 | 3 | CH_pgr_275 | 2 | 2 | 0.0000750356 |
| Pisum sativum | chr7LG7 | 3 | CH_psa_121 | 3 | 7 | 0.000000571327 |
| Sequoiadendron giganteum | chr5 | 3 | CH_sgi_621 | 3 | 5 | 0.000000142381 |
| Vaccinium macrocarpon | chr9_Vaccinium_macrocarpon_Stevens_v1 | 3 | CH_vma_338 | 2 | 4 | 0.000557491 |
| Eucalyptus grandis | Chr06 | 4 | CH_egr_876 | 2 | 6 | 0.000877809 |
| Punica granatum | NC_045130.1 | 4 | CH_pgr_275 | 2 | 2 | 0.0000750356 |
| Pisum sativum | chr7LG7 | 4 | CH_psa_121 | 3 | 7 | 0.000000571327 |
| Sequoiadendron giganteum | chr5 | 4 | CH_sgi_621 | 3 | 5 | 0.000000142381 |
| Vaccinium macrocarpon | chr9_Vaccinium_macrocarpon_Stevens_v1 | 4 | CH_vma_338 | 2 | 4 | 0.000557491 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |