Functional clusters
Information
- Type Gene Ontology
- Description proteasome assembly
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Lonicera japonica | GWHAAZE00000001 | 3 | CH_lonja_198 | 4 | 6 | 0.00000000690798 |
| Manihot esculenta | Chromosome02 | 3 | CH_mes_393 | 3 | 12 | 0.000558345 |
| Oryza sativa ssp. japonica | chr02 | 3 | CH_osa_220 | 4 | 16 | 0.00000585498 |
| Quercus lobata | 8 | 3 | CH_qlo_554 | 3 | 3 | 0.00000271892 |
| Sequoiadendron giganteum | chr9 | 3 | CH_sgi_190 | 6 | 8 | 0.00000000000000320774 |
| Solanum lycopersicum | SL4.0ch11 | 3 | CH_sly_250 | 3 | 3 | 0.00000421679 |
| Vaccinium macrocarpon | chr9_Vaccinium_macrocarpon_Stevens_v1 | 3 | CH_vma_76 | 4 | 5 | 0.00000000860347 |
| Vanilla planifolia | CM028161.1 | 3 | CH_vpl_148 | 3 | 4 | 0.0000119198 |
| Lonicera japonica | GWHAAZE00000001 | 4 | CH_lonja_198 | 4 | 6 | 0.00000000690798 |
| Manihot esculenta | Chromosome02 | 4 | CH_mes_393 | 3 | 12 | 0.000558345 |
| Oryza sativa ssp. japonica | chr02 | 4 | CH_osa_220 | 4 | 16 | 0.00000585498 |
| Quercus lobata | 8 | 4 | CH_qlo_554 | 3 | 3 | 0.00000271892 |
| Sequoiadendron giganteum | chr9 | 4 | CH_sgi_190 | 6 | 8 | 0.00000000000000320774 |
| Solanum lycopersicum | SL4.0ch11 | 4 | CH_sly_250 | 3 | 3 | 0.00000421679 |
| Vaccinium macrocarpon | chr9_Vaccinium_macrocarpon_Stevens_v1 | 4 | CH_vma_76 | 4 | 5 | 0.00000000860347 |
| Vanilla planifolia | CM028161.1 | 4 | CH_vpl_148 | 3 | 4 | 0.0000119198 |
Available child term results
| Ontology identifier | Description | Number of clusters |
|---|---|---|
| GO:0070682 | proteasome regulatory particle assembly | 6 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |