Functional clusters

Information

  • Type Gene Ontology
  • Description negative regulation of catalytic activity

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr4 3 CH_acertr_399 3 4 0.000212722
Actinidia chinensis Lachesis_group22 3 CH_ach_137 5 42 0.0000735147
Arabidopsis lyrata scaffold_1 3 CH_aly_265 4 13 0.000258301
Arabidopsis lyrata scaffold_3 3 CH_aly_32 8 25 0.00000000000347673
Brassica carinata ChrB04 3 CH_bca_108 6 14 0.000000000403262
Brassica carinata ChrC09 3 CH_bca_616 4 14 0.000123604
Brassica carinata ChrB06 3 CH_bca_785 4 18 0.00037657
Brassica carinata ChrC05 3 CH_bca_984 4 22 0.000897149
Brassica napus A01 3 CH_bna_197 5 13 0.000000182512
Brassica napus C01 3 CH_bna_226 5 16 0.000000617823
Brassica napus A05 3 CH_bna_613 4 19 0.000525795
Brassica oleracea C1 3 CH_bol_121 5 14 0.000000177273
Brassica rapa A01 3 CH_bra_188 4 4 0.000118015
Cicer arietinum L. Ca_LG7_v3 3 CH_car_11 7 34 0.000000000392592
Corylus avellana 1 3 CH_cav_181 4 7 0.00000769232
Citrus clementina scaffold_9 3 CH_ccl_323 3 3 0.000124571
Cardamine hirsuta Chr3 3 CH_chi_44 8 22 0.000000000000660202
Carya illinoinensis Chr01 3 CH_cil_212 4 5 0.000000326169
Carica papaya supercontig_9 3 CH_cpa_127 5 39 0.0000225229
Chenopodium quinoa C_Quinoa_Scaffold_2048 3 CH_cqu_109 6 7 0.00000000233475
Capsella rubella scaffold_3 3 CH_cru_189 5 20 0.0000192632
Daucus carota DCARv2_Chr5 3 CH_dca_127 6 8 0.000000247483
Daucus carota DCARv2_Chr8 3 CH_dca_274 4 4 0.000138198
Durio zibethinus NW_019168381.1 3 CH_dzi_149 5 7 0.00000323844
Durio zibethinus NW_019167849.1 3 CH_dzi_172 9 74 0.00000827746
Eutrema salsugineum scaffold_7 3 CH_esa_167 4 11 0.000126661
Eutrema salsugineum scaffold_13 3 CH_esa_26 8 24 0.00000000000297604
Fragaria x ananassa Fvb4-3 3 CH_fan_518 4 21 0.000647919
Fragaria x ananassa Fvb4-4 3 CH_fan_85 6 17 0.000000001282
Fragaria vesca Fvb4 3 CH_fve_58 6 11 0.0000000000597853
Gossypium hirsutum A10 3 CH_ghi_710 5 63 0.000994363
Glycine max Gm17 3 CH_gma_165 6 32 0.000000142232
Glycine max Gm20 3 CH_gma_58 6 10 0.0000000000336905
Helianthus annuus HanXRQChr13 3 CH_han_81 6 7 0.000000000000350295
Lupinus albus Lalb_Chr13 3 CH_lal_173 5 6 0.00000369697
Lupinus albus Lalb_Chr01 3 CH_lal_262 4 4 0.0000897901
Lupinus albus Lalb_Chr03 3 CH_lal_263 4 4 0.0000897901
Lotus japonicus chr4 3 CH_lja_163 6 68 0.00000586044
Lactuca sativa Lsat_1_v8_lg_7 3 CH_lsa_309 3 3 0.0000282969
Malus domestica Chr13 3 CH_mdo_132 5 8 0.00000000274046
Malus domestica Chr16 3 CH_mdo_291 4 7 0.00000180666
Malus domestica Chr03 3 CH_mdo_317 5 28 0.00000473378
Medicago truncatula chr4 3 CH_mtr_51 11 53 2.90442e-17
Oryza sativa ssp. japonica chr08 3 CH_osa_229 5 8 0.00000777535
Oryza sativa ssp. japonica chr11 3 CH_osa_315 5 12 0.000108099
Punica granatum NC_045131.1 3 CH_pgr_236 8 45 0.0000410732
Punica granatum NC_045130.1 3 CH_pgr_277 5 9 0.0000760127
Punica granatum NC_045128.1 3 CH_pgr_284 4 4 0.0000836577
Pisum sativum chr4LG4 3 CH_psa_171 4 13 0.0000123888
Quercus lobata 9 3 CH_qlo_103 11 14 1.07273e-17
Quercus lobata 4 3 CH_qlo_266 7 8 0.000000000147779
Quercus lobata 5 3 CH_qlo_386 6 7 0.0000000201972
Quercus lobata 4 3 CH_qlo_390 8 21 0.0000000223889
Quercus lobata 6 3 CH_qlo_754 4 4 0.0000699279
Rhododendron simsii chr03 3 CH_rsi_259 4 6 0.00000196908
Solanum lycopersicum SL4.0ch03 3 CH_sly_140 8 21 0.0000000104834
Schrenkiella parvula ch3-1 3 CH_spa_15 7 20 0.0000000000764949
Solanum tuberosum ST4.03ch03 3 CH_stu_89 11 26 0.000000000000893882
Trochodendron aralioides group16 3 CH_tar_316 3 3 0.000166831
Trifolium pratense Tp57577_TGAC_v2_LG4 3 CH_tpr_17 9 23 0.0000000000000598627
Vigna mungo CM024074.1 3 CH_vmu_109 5 24 0.00000129944
Zea mays 7 3 CH_zma_243 6 25 0.000167751
Acer truncatum chr4 4 CH_acertr_399 3 4 0.000212722
Actinidia chinensis Lachesis_group22 4 CH_ach_137 5 42 0.0000735147
Arabidopsis lyrata scaffold_1 4 CH_aly_265 4 13 0.000258301
Arabidopsis lyrata scaffold_3 4 CH_aly_32 8 25 0.00000000000347673
Brassica carinata ChrB04 4 CH_bca_108 6 14 0.000000000403262
Brassica carinata ChrC09 4 CH_bca_616 4 14 0.000123604
Brassica carinata ChrB06 4 CH_bca_785 4 18 0.00037657
Brassica carinata ChrC05 4 CH_bca_984 4 22 0.000897149
Brassica napus A01 4 CH_bna_197 5 13 0.000000182512
Brassica napus C01 4 CH_bna_226 5 16 0.000000617823
Brassica napus A05 4 CH_bna_613 4 19 0.000525795
Brassica oleracea C1 4 CH_bol_121 5 14 0.000000177273
Brassica rapa A01 4 CH_bra_188 4 4 0.000118015
Cicer arietinum L. Ca_LG7_v3 4 CH_car_11 7 34 0.000000000392592
Corylus avellana 1 4 CH_cav_181 4 7 0.00000769232
Citrus clementina scaffold_9 4 CH_ccl_323 3 3 0.000124571
Cardamine hirsuta Chr3 4 CH_chi_44 8 22 0.000000000000660202
Carya illinoinensis Chr01 4 CH_cil_212 4 5 0.000000326169
Carica papaya supercontig_9 4 CH_cpa_127 5 39 0.0000225229
Chenopodium quinoa C_Quinoa_Scaffold_2048 4 CH_cqu_109 6 7 0.00000000233475
Capsella rubella scaffold_3 4 CH_cru_189 5 20 0.0000192632
Daucus carota DCARv2_Chr5 4 CH_dca_127 6 8 0.000000247483
Daucus carota DCARv2_Chr8 4 CH_dca_274 4 4 0.000138198
Durio zibethinus NW_019168381.1 4 CH_dzi_149 5 7 0.00000323844
Durio zibethinus NW_019167849.1 4 CH_dzi_172 9 74 0.00000827746
Eutrema salsugineum scaffold_7 4 CH_esa_167 4 11 0.000126661
Eutrema salsugineum scaffold_13 4 CH_esa_26 8 24 0.00000000000297604
Fragaria x ananassa Fvb4-3 4 CH_fan_518 4 21 0.000647919
Fragaria x ananassa Fvb4-4 4 CH_fan_85 6 17 0.000000001282
Fragaria vesca Fvb4 4 CH_fve_58 6 11 0.0000000000597853
Gossypium hirsutum A10 4 CH_ghi_710 5 63 0.000994363
Glycine max Gm17 4 CH_gma_165 6 32 0.000000142232
Glycine max Gm20 4 CH_gma_58 6 10 0.0000000000336905
Helianthus annuus HanXRQChr13 4 CH_han_81 6 7 0.000000000000350295
Lupinus albus Lalb_Chr13 4 CH_lal_173 5 6 0.00000369697
Lupinus albus Lalb_Chr01 4 CH_lal_262 4 4 0.0000897901
Lupinus albus Lalb_Chr03 4 CH_lal_263 4 4 0.0000897901
Lotus japonicus chr4 4 CH_lja_163 6 68 0.00000586044
Lactuca sativa Lsat_1_v8_lg_7 4 CH_lsa_309 3 3 0.0000282969
Malus domestica Chr13 4 CH_mdo_132 5 8 0.00000000274046
Malus domestica Chr16 4 CH_mdo_291 4 7 0.00000180666
Malus domestica Chr03 4 CH_mdo_317 5 28 0.00000473378
Medicago truncatula chr4 4 CH_mtr_51 11 53 2.90442e-17
Oryza sativa ssp. japonica chr08 4 CH_osa_229 5 8 0.00000777535
Oryza sativa ssp. japonica chr11 4 CH_osa_315 5 12 0.000108099
Punica granatum NC_045131.1 4 CH_pgr_236 8 45 0.0000410732
Punica granatum NC_045130.1 4 CH_pgr_277 5 9 0.0000760127
Punica granatum NC_045128.1 4 CH_pgr_284 4 4 0.0000836577
Pisum sativum chr4LG4 4 CH_psa_171 4 13 0.0000123888
Quercus lobata 9 4 CH_qlo_103 11 14 1.07273e-17
Quercus lobata 4 4 CH_qlo_266 7 8 0.000000000147779
Quercus lobata 5 4 CH_qlo_386 6 7 0.0000000201972
Quercus lobata 4 4 CH_qlo_390 8 21 0.0000000223889
Quercus lobata 6 4 CH_qlo_754 4 4 0.0000699279
Rhododendron simsii chr03 4 CH_rsi_259 4 6 0.00000196908
Solanum lycopersicum SL4.0ch03 4 CH_sly_140 8 21 0.0000000104834
Schrenkiella parvula ch3-1 4 CH_spa_15 7 20 0.0000000000764949
Solanum tuberosum ST4.03ch03 4 CH_stu_89 11 26 0.000000000000893882
Trochodendron aralioides group16 4 CH_tar_316 3 3 0.000166831
Trifolium pratense Tp57577_TGAC_v2_LG4 4 CH_tpr_17 9 23 0.0000000000000598627
Vigna mungo CM024074.1 4 CH_vmu_109 5 24 0.00000129944
Zea mays 7 4 CH_zma_243 6 25 0.000167751

Available child term results

Ontology identifier Description Number of clusters
GO:0010466 negative regulation of peptidase activity 14
GO:0010951 negative regulation of endopeptidase activity 28
GO:0032780 negative regulation of ATPase activity 4
GO:0043407 negative regulation of MAP kinase activity 2
GO:1901918 negative regulation of exoribonuclease activity 2
GO:1904667 negative regulation of ubiquitin protein ligase activity 8
GO:1905183 negative regulation of protein serine/threonine phosphatase activity 2
GO:1905775 negative regulation of DNA helicase activity 6
GO:2000117 negative regulation of cysteine-type endopeptidase activity 2
GO:2000469 negative regulation of peroxidase activity 2

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001