Functional clusters
Information
- Type Gene Ontology
- Description ATP-dependent chromatin remodeling
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Brassica carinata | ChrC06 | 3 | CH_bca_239 | 3 | 3 | 0.000000150796 |
| Brassica napus | C07 | 3 | CH_bna_203 | 3 | 3 | 0.000000235147 |
| Corchorus olitorius | AWUE01014941.1 | 3 | CH_col_75 | 2 | 2 | 0.000292099 |
| Davidia involucrata | GWHABJS00000016 | 3 | CH_din_107 | 3 | 3 | 0.0000000750394 |
| Helianthus annuus | HanXRQChr16 | 3 | CH_han_363 | 3 | 9 | 0.0000037617 |
| Micromonas commoda | Chr_06 | 3 | CH_mco_7 | 3 | 20 | 0.0000669063 |
| Rhododendron simsii | chr01 | 3 | CH_rsi_512 | 2 | 2 | 0.000645307 |
| Sequoiadendron giganteum | chr9 | 3 | CH_sgi_1296 | 2 | 2 | 0.000487151 |
| Tarenaya hassleriana | NW_010970490.1 | 3 | CH_tha_185 | 2 | 2 | 0.00069847 |
| Utricularia gibba | unitig_8 | 3 | CH_ugi_123 | 2 | 2 | 0.000492287 |
| Vigna mungo | CM024070.1 | 3 | CH_vmu_305 | 2 | 2 | 0.000646141 |
| Vanilla planifolia | CM028163.1 | 3 | CH_vpl_151 | 3 | 9 | 0.0000137484 |
| Brassica carinata | ChrC06 | 4 | CH_bca_239 | 3 | 3 | 0.000000150796 |
| Brassica napus | C07 | 4 | CH_bna_203 | 3 | 3 | 0.000000235147 |
| Corchorus olitorius | AWUE01014941.1 | 4 | CH_col_75 | 2 | 2 | 0.000292099 |
| Davidia involucrata | GWHABJS00000016 | 4 | CH_din_107 | 3 | 3 | 0.0000000750394 |
| Helianthus annuus | HanXRQChr16 | 4 | CH_han_363 | 3 | 9 | 0.0000037617 |
| Micromonas commoda | Chr_06 | 4 | CH_mco_7 | 3 | 20 | 0.0000669063 |
| Rhododendron simsii | chr01 | 4 | CH_rsi_512 | 2 | 2 | 0.000645307 |
| Sequoiadendron giganteum | chr9 | 4 | CH_sgi_1296 | 2 | 2 | 0.000487151 |
| Tarenaya hassleriana | NW_010970490.1 | 4 | CH_tha_185 | 2 | 2 | 0.00069847 |
| Utricularia gibba | unitig_8 | 4 | CH_ugi_123 | 2 | 2 | 0.000492287 |
| Vigna mungo | CM024070.1 | 4 | CH_vmu_305 | 2 | 2 | 0.000646141 |
| Vanilla planifolia | CM028163.1 | 4 | CH_vpl_151 | 3 | 9 | 0.0000137484 |
Available child term results
| Ontology identifier | Description | Number of clusters |
|---|---|---|
| GO:0034080 | CENP-A containing nucleosome assembly | 4 |
| GO:0043486 | histone exchange | 14 |
| GO:1903099 | positive regulation of CENP-A containing nucleosome assembly | 6 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |