Functional clusters

Information

  • Type Gene Ontology
  • Description ribosomal large subunit binding

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Brassica oleracea C1 3 CH_bol_248 3 34 0.0000383259
Chlamydomonas reinhardtii chromosome_15 3 CH_cre_98 2 2 0.0006824
Erigeron canadensis Conyza_canadensis_scaffold:1 3 CH_eca_329 2 2 0.000134617
Lactuca sativa Lsat_1_v8_lg_9 3 CH_lsa_385 2 2 0.000154202
Pisum sativum chr2LG1 3 CH_psa_9 6 9 5.11026e-18
Papaver somniferum NC_039364.1 3 CH_pso_522 2 2 0.000135176
Rosa chinensis RcHm_v2.0_Chr3 3 CH_rch_674 2 3 0.000358775
Simmondsia chinensis GWHAASQ00000012 3 CH_sci_221 2 2 0.000255428
Sechium edule LG14 3 CH_sed_108 3 5 0.000000763342
Tarenaya hassleriana NW_010961290.1 3 CH_tha_23 4 8 0.000000000357742
Vitis vinifera chr8 3 CH_vvi_334 2 2 0.000228189
Brassica oleracea C1 4 CH_bol_248 3 34 0.0000383259
Chlamydomonas reinhardtii chromosome_15 4 CH_cre_98 2 2 0.0006824
Erigeron canadensis Conyza_canadensis_scaffold:1 4 CH_eca_329 2 2 0.000134617
Lactuca sativa Lsat_1_v8_lg_9 4 CH_lsa_385 2 2 0.000154202
Pisum sativum chr2LG1 4 CH_psa_9 6 9 5.11026e-18
Papaver somniferum NC_039364.1 4 CH_pso_522 2 2 0.000135176
Rosa chinensis RcHm_v2.0_Chr3 4 CH_rch_674 2 3 0.000358775
Simmondsia chinensis GWHAASQ00000012 4 CH_sci_221 2 2 0.000255428
Sechium edule LG14 4 CH_sed_108 3 5 0.000000763342
Tarenaya hassleriana NW_010961290.1 4 CH_tha_23 4 8 0.000000000357742
Vitis vinifera chr8 4 CH_vvi_334 2 2 0.000228189

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001