Functional clusters
Information
- Type Gene Ontology
- Description xanthine transport
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Actinidia chinensis | Lachesis_group12 | 3 | CH_ach_250 | 2 | 6 | 0.00081473 |
| Arabidopsis lyrata | scaffold_5 | 3 | CH_aly_104 | 3 | 8 | 0.000000365905 |
| Cannabis sativa | NC_044379.1 | 3 | CH_cansat_260 | 2 | 3 | 0.000196986 |
| Cicer arietinum L. | Ca_LG2_v3 | 3 | CH_car_109 | 2 | 2 | 0.0000778301 |
| Cucumis melo | chr10 | 3 | CH_cme_199 | 2 | 2 | 0.000200133 |
| Chenopodium quinoa | C_Quinoa_Scaffold_1000 | 3 | CH_cqu_516 | 2 | 2 | 0.000710732 |
| Cucumis sativus L. | chr5 | 3 | CH_csa_91 | 3 | 3 | 0.0000000418111 |
| Erigeron canadensis | Conyza_canadensis_scaffold:1 | 3 | CH_eca_70 | 3 | 3 | 0.00000000302034 |
| Fragaria vesca | Fvb4 | 3 | CH_fve_97 | 3 | 3 | 0.00000000520576 |
| Glycine max | Gm02 | 3 | CH_gma_323 | 2 | 2 | 0.000113867 |
| Gossypium raimondii | Chr13 | 3 | CH_gra_293 | 2 | 4 | 0.000321647 |
| Lotus japonicus | chr2 | 3 | CH_lja_73 | 3 | 3 | 0.00000000767031 |
| Lactuca sativa | Lsat_1_v8_lg_8 | 3 | CH_lsa_131 | 3 | 3 | 0.00000000396314 |
| Oryza sativa ssp. japonica | chr12 | 3 | CH_osa_130 | 3 | 5 | 0.0000000418359 |
| Pisum sativum | chr2LG1 | 3 | CH_psa_263 | 2 | 3 | 0.000156486 |
| Phaseolus vulgaris | Chr03 | 3 | CH_pvu_284 | 2 | 2 | 0.000220418 |
| Striga asiatica | scaffold16 | 3 | CH_sas_107 | 2 | 2 | 0.000625371 |
| Sechium edule | LG07 | 3 | CH_sed_84 | 3 | 3 | 0.000000152696 |
| Solanum pennellii | Spenn-ch05 | 3 | CH_spe_458 | 2 | 3 | 0.000800581 |
| Selenicereus undatus | Scaffold_3410 | 3 | CH_sun_141 | 2 | 2 | 0.000217992 |
| Theobroma cacao | Chromosome_2 | 3 | CH_tca_381 | 2 | 5 | 0.000732306 |
| Trifolium pratense | Tp57577_TGAC_v2_LG2 | 3 | CH_tpr_108 | 3 | 9 | 0.000000721855 |
| Tripterygium wilfordii | NC_052233.1 | 3 | CH_twi_239 | 2 | 2 | 0.000167364 |
| Vigna mungo | CM024074.1 | 3 | CH_vmu_219 | 2 | 3 | 0.000193836 |
| Actinidia chinensis | Lachesis_group12 | 4 | CH_ach_250 | 2 | 6 | 0.00081473 |
| Arabidopsis lyrata | scaffold_5 | 4 | CH_aly_104 | 3 | 8 | 0.000000365905 |
| Cannabis sativa | NC_044379.1 | 4 | CH_cansat_260 | 2 | 3 | 0.000196986 |
| Cicer arietinum L. | Ca_LG2_v3 | 4 | CH_car_109 | 2 | 2 | 0.0000778301 |
| Cucumis melo | chr10 | 4 | CH_cme_199 | 2 | 2 | 0.000200133 |
| Chenopodium quinoa | C_Quinoa_Scaffold_1000 | 4 | CH_cqu_516 | 2 | 2 | 0.000710732 |
| Cucumis sativus L. | chr5 | 4 | CH_csa_91 | 3 | 3 | 0.0000000418111 |
| Erigeron canadensis | Conyza_canadensis_scaffold:1 | 4 | CH_eca_70 | 3 | 3 | 0.00000000302034 |
| Fragaria vesca | Fvb4 | 4 | CH_fve_97 | 3 | 3 | 0.00000000520576 |
| Glycine max | Gm02 | 4 | CH_gma_323 | 2 | 2 | 0.000113867 |
| Gossypium raimondii | Chr13 | 4 | CH_gra_293 | 2 | 4 | 0.000321647 |
| Lotus japonicus | chr2 | 4 | CH_lja_73 | 3 | 3 | 0.00000000767031 |
| Lactuca sativa | Lsat_1_v8_lg_8 | 4 | CH_lsa_131 | 3 | 3 | 0.00000000396314 |
| Oryza sativa ssp. japonica | chr12 | 4 | CH_osa_130 | 3 | 5 | 0.0000000418359 |
| Pisum sativum | chr2LG1 | 4 | CH_psa_263 | 2 | 3 | 0.000156486 |
| Phaseolus vulgaris | Chr03 | 4 | CH_pvu_284 | 2 | 2 | 0.000220418 |
| Striga asiatica | scaffold16 | 4 | CH_sas_107 | 2 | 2 | 0.000625371 |
| Sechium edule | LG07 | 4 | CH_sed_84 | 3 | 3 | 0.000000152696 |
| Solanum pennellii | Spenn-ch05 | 4 | CH_spe_458 | 2 | 3 | 0.000800581 |
| Selenicereus undatus | Scaffold_3410 | 4 | CH_sun_141 | 2 | 2 | 0.000217992 |
| Theobroma cacao | Chromosome_2 | 4 | CH_tca_381 | 2 | 5 | 0.000732306 |
| Trifolium pratense | Tp57577_TGAC_v2_LG2 | 4 | CH_tpr_108 | 3 | 9 | 0.000000721855 |
| Tripterygium wilfordii | NC_052233.1 | 4 | CH_twi_239 | 2 | 2 | 0.000167364 |
| Vigna mungo | CM024074.1 | 4 | CH_vmu_219 | 2 | 3 | 0.000193836 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |