Functional clusters
Information
- Type Gene Ontology
- Description lipid phosphatase activity
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Acer truncatum | chr11 | 3 | CH_acertr_27 | 6 | 23 | 0.0000000000000276628 |
| Aquilegia oxysepala | CHR03 | 3 | CH_aox_225 | 2 | 2 | 0.000240597 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.09 | 3 | CH_arhy_688 | 2 | 2 | 0.000838273 |
| Brassica carinata | ChrC01 | 3 | CH_bca_248 | 3 | 3 | 0.000000196034 |
| Beta vulgaris | Chr6_EL10_PGA_scaffold0 | 3 | CH_bvu_178 | 2 | 2 | 0.0000827917 |
| Cannabis sativa | NC_044373.1 | 3 | CH_cansat_271 | 2 | 2 | 0.000196993 |
| Corylus avellana | 1 | 3 | CH_cav_325 | 2 | 2 | 0.000230008 |
| Coffea canephora | chr11 | 3 | CH_ccan_332 | 2 | 6 | 0.000383294 |
| Carya illinoinensis | Chr06 | 3 | CH_cil_495 | 2 | 2 | 0.000619828 |
| Carya illinoinensis | Chr05 | 3 | CH_cil_496 | 2 | 2 | 0.000619828 |
| Cucumis melo | chr10 | 3 | CH_cme_237 | 2 | 2 | 0.000400267 |
| Chenopodium quinoa | C_Quinoa_Scaffold_3035 | 3 | CH_cqu_548 | 2 | 3 | 0.000852831 |
| Cucumis sativus L. | chr5 | 3 | CH_csa_252 | 2 | 2 | 0.000500856 |
| Davidia involucrata | GWHABJS00000018 | 3 | CH_din_362 | 2 | 2 | 0.000500125 |
| Eucalyptus grandis | Chr02 | 3 | CH_egr_469 | 3 | 3 | 0.000000287747 |
| Gossypium hirsutum | A05 | 3 | CH_ghi_645 | 2 | 2 | 0.000747644 |
| Gossypium hirsutum | D05 | 3 | CH_ghi_646 | 2 | 2 | 0.000747644 |
| Gossypium raimondii | Chr09 | 3 | CH_gra_296 | 2 | 2 | 0.000321664 |
| Lonicera japonica | GWHAAZE00000006 | 3 | CH_lonja_545 | 2 | 2 | 0.000598874 |
| Manihot esculenta | Chromosome14 | 3 | CH_mes_399 | 2 | 2 | 0.000610631 |
| Nelumbo nucifera | chr4 | 3 | CH_nnu_293 | 2 | 2 | 0.000481684 |
| Nelumbo nucifera | chr3 | 3 | CH_nnu_79 | 3 | 3 | 0.0000000348038 |
| Prunus persica | Pp01 | 3 | CH_ppe_423 | 2 | 2 | 0.000447577 |
| Populus trichocarpa | Chr10 | 3 | CH_ptr_421 | 2 | 2 | 0.000578001 |
| Quercus lobata | 1 | 3 | CH_qlo_402 | 3 | 3 | 0.0000000399842 |
| Rosa chinensis | RcHm_v2.0_Chr4 | 3 | CH_rch_225 | 3 | 3 | 0.00000000953562 |
| Rhododendron simsii | chr12 | 3 | CH_rsi_500 | 2 | 2 | 0.000645307 |
| Sechium edule | LG06 | 3 | CH_sed_268 | 2 | 2 | 0.000713419 |
| Solanum pennellii | Spenn-ch05 | 3 | CH_spe_122 | 3 | 3 | 0.0000000296764 |
| Selenicereus undatus | Scaffold_33673 | 3 | CH_sun_91 | 2 | 2 | 0.0000726639 |
| Theobroma cacao | Chromosome_2 | 3 | CH_tca_358 | 2 | 2 | 0.000439432 |
| Tripterygium wilfordii | NC_052233.1 | 3 | CH_twi_326 | 2 | 2 | 0.00083682 |
| Vitis vinifera | chr1 | 3 | CH_vvi_165 | 3 | 4 | 0.000000347115 |
| Acer truncatum | chr11 | 4 | CH_acertr_27 | 6 | 23 | 0.0000000000000276628 |
| Aquilegia oxysepala | CHR03 | 4 | CH_aox_225 | 2 | 2 | 0.000240597 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.09 | 4 | CH_arhy_688 | 2 | 2 | 0.000838273 |
| Brassica carinata | ChrC01 | 4 | CH_bca_248 | 3 | 3 | 0.000000196034 |
| Beta vulgaris | Chr6_EL10_PGA_scaffold0 | 4 | CH_bvu_178 | 2 | 2 | 0.0000827917 |
| Cannabis sativa | NC_044373.1 | 4 | CH_cansat_271 | 2 | 2 | 0.000196993 |
| Corylus avellana | 1 | 4 | CH_cav_325 | 2 | 2 | 0.000230008 |
| Coffea canephora | chr11 | 4 | CH_ccan_332 | 2 | 6 | 0.000383294 |
| Carya illinoinensis | Chr06 | 4 | CH_cil_495 | 2 | 2 | 0.000619828 |
| Carya illinoinensis | Chr05 | 4 | CH_cil_496 | 2 | 2 | 0.000619828 |
| Cucumis melo | chr10 | 4 | CH_cme_237 | 2 | 2 | 0.000400267 |
| Chenopodium quinoa | C_Quinoa_Scaffold_3035 | 4 | CH_cqu_548 | 2 | 3 | 0.000852831 |
| Cucumis sativus L. | chr5 | 4 | CH_csa_252 | 2 | 2 | 0.000500856 |
| Davidia involucrata | GWHABJS00000018 | 4 | CH_din_362 | 2 | 2 | 0.000500125 |
| Eucalyptus grandis | Chr02 | 4 | CH_egr_469 | 3 | 3 | 0.000000287747 |
| Gossypium hirsutum | A05 | 4 | CH_ghi_645 | 2 | 2 | 0.000747644 |
| Gossypium hirsutum | D05 | 4 | CH_ghi_646 | 2 | 2 | 0.000747644 |
| Gossypium raimondii | Chr09 | 4 | CH_gra_296 | 2 | 2 | 0.000321664 |
| Lonicera japonica | GWHAAZE00000006 | 4 | CH_lonja_545 | 2 | 2 | 0.000598874 |
| Manihot esculenta | Chromosome14 | 4 | CH_mes_399 | 2 | 2 | 0.000610631 |
| Nelumbo nucifera | chr4 | 4 | CH_nnu_293 | 2 | 2 | 0.000481684 |
| Nelumbo nucifera | chr3 | 4 | CH_nnu_79 | 3 | 3 | 0.0000000348038 |
| Prunus persica | Pp01 | 4 | CH_ppe_423 | 2 | 2 | 0.000447577 |
| Populus trichocarpa | Chr10 | 4 | CH_ptr_421 | 2 | 2 | 0.000578001 |
| Quercus lobata | 1 | 4 | CH_qlo_402 | 3 | 3 | 0.0000000399842 |
| Rosa chinensis | RcHm_v2.0_Chr4 | 4 | CH_rch_225 | 3 | 3 | 0.00000000953562 |
| Rhododendron simsii | chr12 | 4 | CH_rsi_500 | 2 | 2 | 0.000645307 |
| Sechium edule | LG06 | 4 | CH_sed_268 | 2 | 2 | 0.000713419 |
| Solanum pennellii | Spenn-ch05 | 4 | CH_spe_122 | 3 | 3 | 0.0000000296764 |
| Selenicereus undatus | Scaffold_33673 | 4 | CH_sun_91 | 2 | 2 | 0.0000726639 |
| Theobroma cacao | Chromosome_2 | 4 | CH_tca_358 | 2 | 2 | 0.000439432 |
| Tripterygium wilfordii | NC_052233.1 | 4 | CH_twi_326 | 2 | 2 | 0.00083682 |
| Vitis vinifera | chr1 | 4 | CH_vvi_165 | 3 | 4 | 0.000000347115 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |