Functional clusters
Information
- Type Gene Ontology
- Description regulation of gene expression, epigenetic
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Eutrema salsugineum | scaffold_3 | 3 | CH_esa_92 | 4 | 8 | 0.000000982927 |
| Salvia bowleyana | GWHASIU00000003 | 3 | CH_sbo_469 | 4 | 51 | 0.000614549 |
| Eutrema salsugineum | scaffold_3 | 4 | CH_esa_92 | 4 | 8 | 0.000000982927 |
| Salvia bowleyana | GWHASIU00000003 | 4 | CH_sbo_469 | 4 | 51 | 0.000614549 |
Available child term results
| Ontology identifier | Description | Number of clusters |
|---|---|---|
| GO:0006342 | chromatin silencing | 16 |
| GO:0006348 | chromatin silencing at telomere | 6 |
| GO:0031935 | regulation of chromatin silencing | 8 |
| GO:0031937 | positive regulation of chromatin silencing | 14 |
| GO:0045814 | negative regulation of gene expression, epigenetic | 2 |
| GO:0045815 | positive regulation of gene expression, epigenetic | 2 |
| GO:0070829 | heterochromatin maintenance | 4 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |