Functional clusters
Information
- Type Gene Ontology
- Description L-tryptophan decarboxylase activity
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Brassica carinata | ChrB07 | 3 | CH_bca_756 | 2 | 2 | 0.000320646 |
| Cannabis sativa | NC_044376.1 | 3 | CH_cansat_18 | 7 | 10 | 5.99947e-19 |
| Capsella rubella | scaffold_3 | 3 | CH_cru_321 | 2 | 3 | 0.000657999 |
| Daucus carota | DCARv2_Chr3 | 3 | CH_dca_130 | 3 | 3 | 0.000000341687 |
| Davidia involucrata | GWHABJS00000013 | 3 | CH_din_328 | 2 | 2 | 0.000300075 |
| Durio zibethinus | NW_019167893.1 | 3 | CH_dzi_153 | 3 | 7 | 0.00000394598 |
| Fragaria vesca | Fvb3 | 3 | CH_fve_222 | 3 | 10 | 0.0000218462 |
| Gossypium hirsutum | A01 | 3 | CH_ghi_662 | 2 | 3 | 0.000801015 |
| Helianthus annuus | HanXRQChr17 | 3 | CH_han_218 | 3 | 3 | 0.0000000223995 |
| Magnolia biondii | Chr02 | 3 | CH_mbi_80 | 4 | 4 | 0.0000000000240575 |
| Olea europaea | chr21 | 3 | CH_oeu_219 | 2 | 2 | 0.000160137 |
| Oryza sativa ssp. japonica | chr08 | 3 | CH_osa_344 | 2 | 2 | 0.000158437 |
| Physcomitrium patens | Chr04 | 3 | CH_ppa_23 | 3 | 5 | 0.0000000563133 |
| Populus trichocarpa | Chr13 | 3 | CH_ptr_422 | 2 | 2 | 0.000578001 |
| Rosa chinensis | RcHm_v2.0_Chr5 | 3 | CH_rch_692 | 2 | 2 | 0.000398653 |
| Salix brachista | GWHAAZH00000013 | 3 | CH_sbr_347 | 2 | 5 | 0.00063008 |
| Sequoiadendron giganteum | chr9 | 3 | CH_sgi_939 | 2 | 2 | 0.0000487151 |
| Solanum tuberosum | ST4.03ch07 | 3 | CH_stu_189 | 3 | 3 | 0.0000000393922 |
| Tripterygium wilfordii | NC_052244.1 | 3 | CH_twi_91 | 3 | 5 | 0.0000000466832 |
| Vitis vinifera | chr10 | 3 | CH_vvi_412 | 2 | 2 | 0.00076063 |
| Brassica carinata | ChrB07 | 4 | CH_bca_756 | 2 | 2 | 0.000320646 |
| Cannabis sativa | NC_044376.1 | 4 | CH_cansat_18 | 7 | 10 | 5.99947e-19 |
| Capsella rubella | scaffold_3 | 4 | CH_cru_321 | 2 | 3 | 0.000657999 |
| Daucus carota | DCARv2_Chr3 | 4 | CH_dca_130 | 3 | 3 | 0.000000341687 |
| Davidia involucrata | GWHABJS00000013 | 4 | CH_din_328 | 2 | 2 | 0.000300075 |
| Durio zibethinus | NW_019167893.1 | 4 | CH_dzi_153 | 3 | 7 | 0.00000394598 |
| Fragaria vesca | Fvb3 | 4 | CH_fve_222 | 3 | 10 | 0.0000218462 |
| Gossypium hirsutum | A01 | 4 | CH_ghi_662 | 2 | 3 | 0.000801015 |
| Helianthus annuus | HanXRQChr17 | 4 | CH_han_218 | 3 | 3 | 0.0000000223995 |
| Magnolia biondii | Chr02 | 4 | CH_mbi_80 | 4 | 4 | 0.0000000000240575 |
| Olea europaea | chr21 | 4 | CH_oeu_219 | 2 | 2 | 0.000160137 |
| Oryza sativa ssp. japonica | chr08 | 4 | CH_osa_344 | 2 | 2 | 0.000158437 |
| Physcomitrium patens | Chr04 | 4 | CH_ppa_23 | 3 | 5 | 0.0000000563133 |
| Populus trichocarpa | Chr13 | 4 | CH_ptr_422 | 2 | 2 | 0.000578001 |
| Rosa chinensis | RcHm_v2.0_Chr5 | 4 | CH_rch_692 | 2 | 2 | 0.000398653 |
| Salix brachista | GWHAAZH00000013 | 4 | CH_sbr_347 | 2 | 5 | 0.00063008 |
| Sequoiadendron giganteum | chr9 | 4 | CH_sgi_939 | 2 | 2 | 0.0000487151 |
| Solanum tuberosum | ST4.03ch07 | 4 | CH_stu_189 | 3 | 3 | 0.0000000393922 |
| Tripterygium wilfordii | NC_052244.1 | 4 | CH_twi_91 | 3 | 5 | 0.0000000466832 |
| Vitis vinifera | chr10 | 4 | CH_vvi_412 | 2 | 2 | 0.00076063 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |