Functional clusters
Information
- Type Gene Ontology
- Description arbuscular mycorrhizal association
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Aquilegia oxysepala | CHR06 | 3 | CH_aox_76 | 3 | 3 | 0.0000000964818 |
| Brassica carinata | Contig723 | 3 | CH_bca_192 | 3 | 3 | 0.0000000383844 |
| Capsicum annuum | PGAv.1.6.scaffold1075 | 3 | CH_can_320 | 2 | 2 | 0.0000826105 |
| Coffea canephora | chr7 | 3 | CH_ccan_370 | 2 | 10 | 0.000574936 |
| Carica papaya | supercontig_90 | 3 | CH_cpa_241 | 2 | 2 | 0.000285198 |
| Helianthus annuus | HanXRQChr03 | 3 | CH_han_253 | 3 | 3 | 0.000000125437 |
| Lactuca sativa | Lsat_1_v8_lg_4 | 3 | CH_lsa_393 | 2 | 2 | 0.000154202 |
| Malus domestica | Chr02 | 3 | CH_mdo_682 | 2 | 3 | 0.000682551 |
| Manihot esculenta | Chromosome13 | 3 | CH_mes_66 | 5 | 6 | 0.0000000000000350388 |
| Petunia axillaris | Peaxi162Scf00264 | 3 | CH_pax_269 | 2 | 2 | 0.000211067 |
| Striga asiatica | scaffold62 | 3 | CH_sas_49 | 3 | 4 | 0.0000267398 |
| Striga asiatica | scaffold21 | 3 | CH_sas_63 | 3 | 5 | 0.0000668209 |
| Striga asiatica | scaffold8 | 3 | CH_sas_87 | 3 | 7 | 0.000233672 |
| Sequoiadendron giganteum | chr5 | 3 | CH_sgi_524 | 3 | 3 | 0.0000000142393 |
| Solanum lycopersicum | SL4.0ch02 | 3 | CH_sly_501 | 2 | 2 | 0.000352164 |
| Solanum pennellii | Spenn-ch02 | 3 | CH_spe_425 | 2 | 2 | 0.00044479 |
| Solanum pennellii | Spenn-ch02 | 3 | CH_spe_426 | 2 | 2 | 0.00044479 |
| Solanum tuberosum | ST4.03ch02 | 3 | CH_stu_585 | 2 | 2 | 0.000512453 |
| Solanum tuberosum | ST4.03ch02 | 3 | CH_stu_586 | 2 | 2 | 0.000512453 |
| Tripterygium wilfordii | NC_052245.1 | 3 | CH_twi_288 | 2 | 2 | 0.000334728 |
| Vigna mungo | CM024069.1 | 3 | CH_vmu_284 | 2 | 2 | 0.000387685 |
| Vanilla planifolia | CM028161.1 | 3 | CH_vpl_361 | 2 | 2 | 0.00073888 |
| Aquilegia oxysepala | CHR06 | 4 | CH_aox_76 | 3 | 3 | 0.0000000964818 |
| Brassica carinata | Contig723 | 4 | CH_bca_192 | 3 | 3 | 0.0000000383844 |
| Capsicum annuum | PGAv.1.6.scaffold1075 | 4 | CH_can_320 | 2 | 2 | 0.0000826105 |
| Coffea canephora | chr7 | 4 | CH_ccan_370 | 2 | 10 | 0.000574936 |
| Carica papaya | supercontig_90 | 4 | CH_cpa_241 | 2 | 2 | 0.000285198 |
| Helianthus annuus | HanXRQChr03 | 4 | CH_han_253 | 3 | 3 | 0.000000125437 |
| Lactuca sativa | Lsat_1_v8_lg_4 | 4 | CH_lsa_393 | 2 | 2 | 0.000154202 |
| Malus domestica | Chr02 | 4 | CH_mdo_682 | 2 | 3 | 0.000682551 |
| Manihot esculenta | Chromosome13 | 4 | CH_mes_66 | 5 | 6 | 0.0000000000000350388 |
| Petunia axillaris | Peaxi162Scf00264 | 4 | CH_pax_269 | 2 | 2 | 0.000211067 |
| Striga asiatica | scaffold62 | 4 | CH_sas_49 | 3 | 4 | 0.0000267398 |
| Striga asiatica | scaffold21 | 4 | CH_sas_63 | 3 | 5 | 0.0000668209 |
| Striga asiatica | scaffold8 | 4 | CH_sas_87 | 3 | 7 | 0.000233672 |
| Sequoiadendron giganteum | chr5 | 4 | CH_sgi_524 | 3 | 3 | 0.0000000142393 |
| Solanum lycopersicum | SL4.0ch02 | 4 | CH_sly_501 | 2 | 2 | 0.000352164 |
| Solanum pennellii | Spenn-ch02 | 4 | CH_spe_425 | 2 | 2 | 0.00044479 |
| Solanum pennellii | Spenn-ch02 | 4 | CH_spe_426 | 2 | 2 | 0.00044479 |
| Solanum tuberosum | ST4.03ch02 | 4 | CH_stu_585 | 2 | 2 | 0.000512453 |
| Solanum tuberosum | ST4.03ch02 | 4 | CH_stu_586 | 2 | 2 | 0.000512453 |
| Tripterygium wilfordii | NC_052245.1 | 4 | CH_twi_288 | 2 | 2 | 0.000334728 |
| Vigna mungo | CM024069.1 | 4 | CH_vmu_284 | 2 | 2 | 0.000387685 |
| Vanilla planifolia | CM028161.1 | 4 | CH_vpl_361 | 2 | 2 | 0.00073888 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |