Functional clusters
Information
- Type Gene Ontology
- Description DNA demethylase activity
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Aethionema arabicum | csc-22 | 3 | CH_aar_113 | 3 | 3 | 0.00000568096 |
| Aethionema arabicum | LG-9 | 3 | CH_aar_176 | 3 | 6 | 0.000113464 |
| Actinidia chinensis | Lachesis_group20 | 3 | CH_ach_56 | 3 | 3 | 0.000000371811 |
| Arabidopsis lyrata | scaffold_4 | 3 | CH_aly_369 | 2 | 2 | 0.000990066 |
| Brassica carinata | ChrC07 | 3 | CH_bca_964 | 2 | 2 | 0.000769551 |
| Carica papaya | supercontig_5 | 3 | CH_cpa_272 | 2 | 2 | 0.000570396 |
| Lupinus albus | Lalb_Chr19 | 3 | CH_lal_133 | 3 | 3 | 0.000000495806 |
| Lupinus albus | Lalb_Chr02 | 3 | CH_lal_61 | 4 | 4 | 0.0000000000910786 |
| Medicago truncatula | chr2 | 3 | CH_mtr_349 | 3 | 3 | 0.000000921714 |
| Oryza sativa ssp. japonica | chr05 | 3 | CH_osa_188 | 3 | 5 | 0.00000146402 |
| Rosa chinensis | RcHm_v2.0_Chr6 | 3 | CH_rch_360 | 3 | 7 | 0.0000016683 |
| Solanum lycopersicum | SL4.0ch04 | 3 | CH_sly_274 | 3 | 6 | 0.00000867743 |
| Trochodendron aralioides | group12 | 3 | CH_tar_136 | 3 | 3 | 0.000000189236 |
| Vanilla planifolia | CM028157.1 | 3 | CH_vpl_88 | 3 | 3 | 0.000000286631 |
| Aethionema arabicum | csc-22 | 4 | CH_aar_113 | 3 | 3 | 0.00000568096 |
| Aethionema arabicum | LG-9 | 4 | CH_aar_176 | 3 | 6 | 0.000113464 |
| Actinidia chinensis | Lachesis_group20 | 4 | CH_ach_56 | 3 | 3 | 0.000000371811 |
| Arabidopsis lyrata | scaffold_4 | 4 | CH_aly_369 | 2 | 2 | 0.000990066 |
| Brassica carinata | ChrC07 | 4 | CH_bca_964 | 2 | 2 | 0.000769551 |
| Carica papaya | supercontig_5 | 4 | CH_cpa_272 | 2 | 2 | 0.000570396 |
| Lupinus albus | Lalb_Chr19 | 4 | CH_lal_133 | 3 | 3 | 0.000000495806 |
| Lupinus albus | Lalb_Chr02 | 4 | CH_lal_61 | 4 | 4 | 0.0000000000910786 |
| Medicago truncatula | chr2 | 4 | CH_mtr_349 | 3 | 3 | 0.000000921714 |
| Oryza sativa ssp. japonica | chr05 | 4 | CH_osa_188 | 3 | 5 | 0.00000146402 |
| Rosa chinensis | RcHm_v2.0_Chr6 | 4 | CH_rch_360 | 3 | 7 | 0.0000016683 |
| Solanum lycopersicum | SL4.0ch04 | 4 | CH_sly_274 | 3 | 6 | 0.00000867743 |
| Trochodendron aralioides | group12 | 4 | CH_tar_136 | 3 | 3 | 0.000000189236 |
| Vanilla planifolia | CM028157.1 | 4 | CH_vpl_88 | 3 | 3 | 0.000000286631 |
Available child term results
| Ontology identifier | Description | Number of clusters |
|---|---|---|
| GO:0051747 | cytosine C-5 DNA demethylase activity | 2 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |