Functional clusters

Information

  • Type Gene Ontology
  • Description FACT complex

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Anthoceros agrestis Sc2ySwM_344 3 CH_aag_73 3 4 0.00000463666
Acer truncatum chr12 3 CH_acertr_459 2 2 0.000422982
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.13 3 CH_arhy_576 2 2 0.000299383
Amborella trichopoda AmTr_v1.0_scaffold00039 3 CH_atr_298 2 2 0.000476644
Brassica napus A09 3 CH_bna_648 2 2 0.00066822
Camellia sinensis var. sinensis Chr3 3 CH_camsi_140 4 7 0.000000000354273
Corylus avellana 2 3 CH_cav_344 2 2 0.000230008
Citrus clementina scaffold_6 3 CH_ccl_362 2 2 0.000246093
Carpinus fangiana Cfa02 3 CH_cfa_334 2 2 0.000757346
Carya illinoinensis Chr07 3 CH_cil_223 3 5 0.000000576209
Daucus carota DCARv2_Chr2 3 CH_dca_137 3 4 0.000000488074
Davidia involucrata GWHABJS00000005 3 CH_din_373 2 2 0.000500125
Davidia involucrata GWHABJS00000002 3 CH_din_374 2 2 0.000500125
Durio zibethinus NW_019168481.1 3 CH_dzi_329 2 2 0.000695233
Gossypium hirsutum A13 3 CH_ghi_117 4 4 0.0000000000282718
Glycine max Gm11 3 CH_gma_527 2 2 0.00079707
Gossypium raimondii Chr13 3 CH_gra_344 2 2 0.000536107
Lonicera japonica GWHAAZE00000005 3 CH_lonja_556 2 2 0.000598874
Malus domestica Chr12 3 CH_mdo_651 2 2 0.000568817
Malus domestica Chr04 3 CH_mdo_652 2 2 0.000568817
Manihot esculenta Chromosome04 3 CH_mes_407 2 2 0.000610631
Prunus persica Pp06 3 CH_ppe_392 2 2 0.000223789
Papaver somniferum NC_039364.1 3 CH_pso_259 6 76 0.000000196296
Papaver somniferum NC_039363.1 3 CH_pso_371 3 3 0.0000100836
Populus trichocarpa Chr13 3 CH_ptr_453 2 2 0.000867002
Populus trichocarpa Chr05 3 CH_ptr_454 2 2 0.000867002
Phaseolus vulgaris Chr06 3 CH_pvu_337 2 2 0.000440836
Rhododendron simsii chr11 3 CH_rsi_536 2 2 0.000967961
Salvia bowleyana GWHASIU00000005 3 CH_sbo_167 3 3 0.0000000310517
Salix brachista GWHAAZH00000013 3 CH_sbr_392 2 2 0.000945209
Salix brachista GWHAAZH00000005 3 CH_sbr_393 2 2 0.000945209
Solanum lycopersicum SL4.0ch01 3 CH_sly_549 2 2 0.000586941
Solanum pennellii Spenn-ch01 3 CH_spe_424 2 2 0.00044479
Trochodendron aralioides group16 3 CH_tar_54 4 7 0.0000000001136
Theobroma cacao Chromosome_5 3 CH_tca_338 2 2 0.000219716
Trifolium pratense Tp57577_TGAC_v2_scaf_142 3 CH_tpr_337 2 2 0.000454184
Vitis vinifera chr14 3 CH_vvi_339 2 2 0.000228189
Anthoceros agrestis Sc2ySwM_344 4 CH_aag_73 3 4 0.00000463666
Acer truncatum chr12 4 CH_acertr_459 2 2 0.000422982
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.13 4 CH_arhy_576 2 2 0.000299383
Amborella trichopoda AmTr_v1.0_scaffold00039 4 CH_atr_298 2 2 0.000476644
Brassica napus A09 4 CH_bna_648 2 2 0.00066822
Camellia sinensis var. sinensis Chr3 4 CH_camsi_140 4 7 0.000000000354273
Corylus avellana 2 4 CH_cav_344 2 2 0.000230008
Citrus clementina scaffold_6 4 CH_ccl_362 2 2 0.000246093
Carpinus fangiana Cfa02 4 CH_cfa_334 2 2 0.000757346
Carya illinoinensis Chr07 4 CH_cil_223 3 5 0.000000576209
Daucus carota DCARv2_Chr2 4 CH_dca_137 3 4 0.000000488074
Davidia involucrata GWHABJS00000005 4 CH_din_373 2 2 0.000500125
Davidia involucrata GWHABJS00000002 4 CH_din_374 2 2 0.000500125
Durio zibethinus NW_019168481.1 4 CH_dzi_329 2 2 0.000695233
Gossypium hirsutum A13 4 CH_ghi_117 4 4 0.0000000000282718
Glycine max Gm11 4 CH_gma_527 2 2 0.00079707
Gossypium raimondii Chr13 4 CH_gra_344 2 2 0.000536107
Lonicera japonica GWHAAZE00000005 4 CH_lonja_556 2 2 0.000598874
Malus domestica Chr12 4 CH_mdo_651 2 2 0.000568817
Malus domestica Chr04 4 CH_mdo_652 2 2 0.000568817
Manihot esculenta Chromosome04 4 CH_mes_407 2 2 0.000610631
Prunus persica Pp06 4 CH_ppe_392 2 2 0.000223789
Papaver somniferum NC_039364.1 4 CH_pso_259 6 76 0.000000196296
Papaver somniferum NC_039363.1 4 CH_pso_371 3 3 0.0000100836
Populus trichocarpa Chr13 4 CH_ptr_453 2 2 0.000867002
Populus trichocarpa Chr05 4 CH_ptr_454 2 2 0.000867002
Phaseolus vulgaris Chr06 4 CH_pvu_337 2 2 0.000440836
Rhododendron simsii chr11 4 CH_rsi_536 2 2 0.000967961
Salvia bowleyana GWHASIU00000005 4 CH_sbo_167 3 3 0.0000000310517
Salix brachista GWHAAZH00000013 4 CH_sbr_392 2 2 0.000945209
Salix brachista GWHAAZH00000005 4 CH_sbr_393 2 2 0.000945209
Solanum lycopersicum SL4.0ch01 4 CH_sly_549 2 2 0.000586941
Solanum pennellii Spenn-ch01 4 CH_spe_424 2 2 0.00044479
Trochodendron aralioides group16 4 CH_tar_54 4 7 0.0000000001136
Theobroma cacao Chromosome_5 4 CH_tca_338 2 2 0.000219716
Trifolium pratense Tp57577_TGAC_v2_scaf_142 4 CH_tpr_337 2 2 0.000454184
Vitis vinifera chr14 4 CH_vvi_339 2 2 0.000228189

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001