Functional clusters
Information
- Type Gene Ontology
- Description FACT complex
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Anthoceros agrestis | Sc2ySwM_344 | 3 | CH_aag_73 | 3 | 4 | 0.00000463666 |
Acer truncatum | chr12 | 3 | CH_acertr_459 | 2 | 2 | 0.000422982 |
Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.13 | 3 | CH_arhy_576 | 2 | 2 | 0.000299383 |
Amborella trichopoda | AmTr_v1.0_scaffold00039 | 3 | CH_atr_298 | 2 | 2 | 0.000476644 |
Brassica napus | A09 | 3 | CH_bna_648 | 2 | 2 | 0.00066822 |
Camellia sinensis var. sinensis | Chr3 | 3 | CH_camsi_140 | 4 | 7 | 0.000000000354273 |
Corylus avellana | 2 | 3 | CH_cav_344 | 2 | 2 | 0.000230008 |
Citrus clementina | scaffold_6 | 3 | CH_ccl_362 | 2 | 2 | 0.000246093 |
Carpinus fangiana | Cfa02 | 3 | CH_cfa_334 | 2 | 2 | 0.000757346 |
Carya illinoinensis | Chr07 | 3 | CH_cil_223 | 3 | 5 | 0.000000576209 |
Daucus carota | DCARv2_Chr2 | 3 | CH_dca_137 | 3 | 4 | 0.000000488074 |
Davidia involucrata | GWHABJS00000005 | 3 | CH_din_373 | 2 | 2 | 0.000500125 |
Davidia involucrata | GWHABJS00000002 | 3 | CH_din_374 | 2 | 2 | 0.000500125 |
Durio zibethinus | NW_019168481.1 | 3 | CH_dzi_329 | 2 | 2 | 0.000695233 |
Gossypium hirsutum | A13 | 3 | CH_ghi_117 | 4 | 4 | 0.0000000000282718 |
Glycine max | Gm11 | 3 | CH_gma_527 | 2 | 2 | 0.00079707 |
Gossypium raimondii | Chr13 | 3 | CH_gra_344 | 2 | 2 | 0.000536107 |
Lonicera japonica | GWHAAZE00000005 | 3 | CH_lonja_556 | 2 | 2 | 0.000598874 |
Malus domestica | Chr12 | 3 | CH_mdo_651 | 2 | 2 | 0.000568817 |
Malus domestica | Chr04 | 3 | CH_mdo_652 | 2 | 2 | 0.000568817 |
Manihot esculenta | Chromosome04 | 3 | CH_mes_407 | 2 | 2 | 0.000610631 |
Prunus persica | Pp06 | 3 | CH_ppe_392 | 2 | 2 | 0.000223789 |
Papaver somniferum | NC_039364.1 | 3 | CH_pso_259 | 6 | 76 | 0.000000196296 |
Papaver somniferum | NC_039363.1 | 3 | CH_pso_371 | 3 | 3 | 0.0000100836 |
Populus trichocarpa | Chr13 | 3 | CH_ptr_453 | 2 | 2 | 0.000867002 |
Populus trichocarpa | Chr05 | 3 | CH_ptr_454 | 2 | 2 | 0.000867002 |
Phaseolus vulgaris | Chr06 | 3 | CH_pvu_337 | 2 | 2 | 0.000440836 |
Rhododendron simsii | chr11 | 3 | CH_rsi_536 | 2 | 2 | 0.000967961 |
Salvia bowleyana | GWHASIU00000005 | 3 | CH_sbo_167 | 3 | 3 | 0.0000000310517 |
Salix brachista | GWHAAZH00000013 | 3 | CH_sbr_392 | 2 | 2 | 0.000945209 |
Salix brachista | GWHAAZH00000005 | 3 | CH_sbr_393 | 2 | 2 | 0.000945209 |
Solanum lycopersicum | SL4.0ch01 | 3 | CH_sly_549 | 2 | 2 | 0.000586941 |
Solanum pennellii | Spenn-ch01 | 3 | CH_spe_424 | 2 | 2 | 0.00044479 |
Trochodendron aralioides | group16 | 3 | CH_tar_54 | 4 | 7 | 0.0000000001136 |
Theobroma cacao | Chromosome_5 | 3 | CH_tca_338 | 2 | 2 | 0.000219716 |
Trifolium pratense | Tp57577_TGAC_v2_scaf_142 | 3 | CH_tpr_337 | 2 | 2 | 0.000454184 |
Vitis vinifera | chr14 | 3 | CH_vvi_339 | 2 | 2 | 0.000228189 |
Anthoceros agrestis | Sc2ySwM_344 | 4 | CH_aag_73 | 3 | 4 | 0.00000463666 |
Acer truncatum | chr12 | 4 | CH_acertr_459 | 2 | 2 | 0.000422982 |
Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.13 | 4 | CH_arhy_576 | 2 | 2 | 0.000299383 |
Amborella trichopoda | AmTr_v1.0_scaffold00039 | 4 | CH_atr_298 | 2 | 2 | 0.000476644 |
Brassica napus | A09 | 4 | CH_bna_648 | 2 | 2 | 0.00066822 |
Camellia sinensis var. sinensis | Chr3 | 4 | CH_camsi_140 | 4 | 7 | 0.000000000354273 |
Corylus avellana | 2 | 4 | CH_cav_344 | 2 | 2 | 0.000230008 |
Citrus clementina | scaffold_6 | 4 | CH_ccl_362 | 2 | 2 | 0.000246093 |
Carpinus fangiana | Cfa02 | 4 | CH_cfa_334 | 2 | 2 | 0.000757346 |
Carya illinoinensis | Chr07 | 4 | CH_cil_223 | 3 | 5 | 0.000000576209 |
Daucus carota | DCARv2_Chr2 | 4 | CH_dca_137 | 3 | 4 | 0.000000488074 |
Davidia involucrata | GWHABJS00000005 | 4 | CH_din_373 | 2 | 2 | 0.000500125 |
Davidia involucrata | GWHABJS00000002 | 4 | CH_din_374 | 2 | 2 | 0.000500125 |
Durio zibethinus | NW_019168481.1 | 4 | CH_dzi_329 | 2 | 2 | 0.000695233 |
Gossypium hirsutum | A13 | 4 | CH_ghi_117 | 4 | 4 | 0.0000000000282718 |
Glycine max | Gm11 | 4 | CH_gma_527 | 2 | 2 | 0.00079707 |
Gossypium raimondii | Chr13 | 4 | CH_gra_344 | 2 | 2 | 0.000536107 |
Lonicera japonica | GWHAAZE00000005 | 4 | CH_lonja_556 | 2 | 2 | 0.000598874 |
Malus domestica | Chr12 | 4 | CH_mdo_651 | 2 | 2 | 0.000568817 |
Malus domestica | Chr04 | 4 | CH_mdo_652 | 2 | 2 | 0.000568817 |
Manihot esculenta | Chromosome04 | 4 | CH_mes_407 | 2 | 2 | 0.000610631 |
Prunus persica | Pp06 | 4 | CH_ppe_392 | 2 | 2 | 0.000223789 |
Papaver somniferum | NC_039364.1 | 4 | CH_pso_259 | 6 | 76 | 0.000000196296 |
Papaver somniferum | NC_039363.1 | 4 | CH_pso_371 | 3 | 3 | 0.0000100836 |
Populus trichocarpa | Chr13 | 4 | CH_ptr_453 | 2 | 2 | 0.000867002 |
Populus trichocarpa | Chr05 | 4 | CH_ptr_454 | 2 | 2 | 0.000867002 |
Phaseolus vulgaris | Chr06 | 4 | CH_pvu_337 | 2 | 2 | 0.000440836 |
Rhododendron simsii | chr11 | 4 | CH_rsi_536 | 2 | 2 | 0.000967961 |
Salvia bowleyana | GWHASIU00000005 | 4 | CH_sbo_167 | 3 | 3 | 0.0000000310517 |
Salix brachista | GWHAAZH00000013 | 4 | CH_sbr_392 | 2 | 2 | 0.000945209 |
Salix brachista | GWHAAZH00000005 | 4 | CH_sbr_393 | 2 | 2 | 0.000945209 |
Solanum lycopersicum | SL4.0ch01 | 4 | CH_sly_549 | 2 | 2 | 0.000586941 |
Solanum pennellii | Spenn-ch01 | 4 | CH_spe_424 | 2 | 2 | 0.00044479 |
Trochodendron aralioides | group16 | 4 | CH_tar_54 | 4 | 7 | 0.0000000001136 |
Theobroma cacao | Chromosome_5 | 4 | CH_tca_338 | 2 | 2 | 0.000219716 |
Trifolium pratense | Tp57577_TGAC_v2_scaf_142 | 4 | CH_tpr_337 | 2 | 2 | 0.000454184 |
Vitis vinifera | chr14 | 4 | CH_vvi_339 | 2 | 2 | 0.000228189 |
Functional Clusters Experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |