Functional clusters

Information

  • Type Gene Ontology
  • Description U3 snoRNA binding

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Actinidia chinensis Lachesis_group12 3 CH_ach_255 2 2 0.000814819
Coffea canephora chr6 3 CH_ccan_259 2 8 0.000127766
Daucus carota DCARv2_Chr2 3 CH_dca_296 2 2 0.000191333
Malus domestica Chr13 3 CH_mdo_601 2 2 0.000379212
Medicago truncatula chr8 3 CH_mtr_711 2 2 0.000616295
Nelumbo nucifera chr2 3 CH_nnu_256 2 2 0.00028901
Pisum sativum chr4LG4 3 CH_psa_316 2 2 0.000312981
Simmondsia chinensis GWHAASQ00000006 3 CH_sci_208 2 2 0.000255428
Sequoiadendron giganteum chr5 3 CH_sgi_571 3 4 0.0000000569549
Solanum pennellii Spenn-ch07 3 CH_spe_337 2 2 0.000133437
Vanilla planifolia CM028150.1 3 CH_vpl_264 2 2 0.000221664
Actinidia chinensis Lachesis_group12 4 CH_ach_255 2 2 0.000814819
Coffea canephora chr6 4 CH_ccan_259 2 8 0.000127766
Daucus carota DCARv2_Chr2 4 CH_dca_296 2 2 0.000191333
Malus domestica Chr13 4 CH_mdo_601 2 2 0.000379212
Medicago truncatula chr8 4 CH_mtr_711 2 2 0.000616295
Nelumbo nucifera chr2 4 CH_nnu_256 2 2 0.00028901
Pisum sativum chr4LG4 4 CH_psa_316 2 2 0.000312981
Simmondsia chinensis GWHAASQ00000006 4 CH_sci_208 2 2 0.000255428
Sequoiadendron giganteum chr5 4 CH_sgi_571 3 4 0.0000000569549
Solanum pennellii Spenn-ch07 4 CH_spe_337 2 2 0.000133437
Vanilla planifolia CM028150.1 4 CH_vpl_264 2 2 0.000221664

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001