Functional clusters

Information

  • Type Gene Ontology
  • Description ubiquitin-ubiquitin ligase activity

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Actinidia chinensis Lachesis_group21 3 CH_ach_169 2 2 0.000162964
Amaranthus hybridus AmaHy_arrow1_Scaffold_12 3 CH_amhyb_104 2 2 0.0000841751
Aquilegia oxysepala CHR03 3 CH_aox_261 2 2 0.000481193
Fragaria x ananassa Fvb3-3 3 CH_fan_185 3 3 0.000000585482
Fragaria x ananassa Fvb3-2 3 CH_fan_186 3 3 0.000000585482
Fragaria vesca Fvb3 3 CH_fve_331 2 2 0.000353461
Pisum sativum chr1LG6 3 CH_psa_70 3 3 0.0000000163266
Quercus lobata CM012294 3 CH_qlo_563 3 18 0.00000326144
Actinidia chinensis Lachesis_group21 4 CH_ach_169 2 2 0.000162964
Amaranthus hybridus AmaHy_arrow1_Scaffold_12 4 CH_amhyb_104 2 2 0.0000841751
Aquilegia oxysepala CHR03 4 CH_aox_261 2 2 0.000481193
Fragaria x ananassa Fvb3-3 4 CH_fan_185 3 3 0.000000585482
Fragaria x ananassa Fvb3-2 4 CH_fan_186 3 3 0.000000585482
Fragaria vesca Fvb3 4 CH_fve_331 2 2 0.000353461
Pisum sativum chr1LG6 4 CH_psa_70 3 3 0.0000000163266
Quercus lobata CM012294 4 CH_qlo_563 3 18 0.00000326144

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001