Functional clusters
Information
- Type Gene Ontology
- Description collagen metabolic process
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.18 | 3 | CH_arhy_700 | 2 | 2 | 0.000838273 |
Brassica carinata | ChrC08 | 3 | CH_bca_923 | 2 | 3 | 0.000641272 |
Corylus avellana | 9 | 3 | CH_cav_268 | 2 | 2 | 0.0000766695 |
Sequoiadendron giganteum | chr11 | 3 | CH_sgi_994 | 2 | 2 | 0.0000487151 |
Vigna mungo | CM024069.1 | 3 | CH_vmu_188 | 2 | 2 | 0.0000646141 |
Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.18 | 4 | CH_arhy_700 | 2 | 2 | 0.000838273 |
Brassica carinata | ChrC08 | 4 | CH_bca_923 | 2 | 3 | 0.000641272 |
Corylus avellana | 9 | 4 | CH_cav_268 | 2 | 2 | 0.0000766695 |
Sequoiadendron giganteum | chr11 | 4 | CH_sgi_994 | 2 | 2 | 0.0000487151 |
Vigna mungo | CM024069.1 | 4 | CH_vmu_188 | 2 | 2 | 0.0000646141 |
Available child term results
Ontology identifier | Description | Number of clusters |
---|---|---|
GO:0030574 | collagen catabolic process | 4 |
Functional Clusters Experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |