Functional clusters
Information
- Type Gene Ontology
- Description endocytic recycling
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.17 | 3 | CH_arhy_103 | 8 | 46 | 0.0000000000000180951 |
| Amborella trichopoda | AmTr_v1.0_scaffold00014 | 3 | CH_atr_145 | 3 | 5 | 0.00000529931 |
| Carica papaya | supercontig_12 | 3 | CH_cpa_85 | 3 | 3 | 0.00000113879 |
| Eucalyptus grandis | Chr06 | 3 | CH_egr_743 | 3 | 18 | 0.000146494 |
| Lonicera japonica | GWHAAZE00000001 | 3 | CH_lonja_578 | 3 | 18 | 0.000722077 |
| Nicotiana tabacum | Nitab4.5_0000168 | 3 | CH_nta_125 | 3 | 17 | 0.000428535 |
| Salvia bowleyana | GWHASIU00000004 | 3 | CH_sbo_517 | 2 | 2 | 0.000955457 |
| Sequoiadendron giganteum | chr10 | 3 | CH_sgi_747 | 3 | 4 | 0.00000170846 |
| Vitis vinifera | chr19 | 3 | CH_vvi_387 | 3 | 23 | 0.000536314 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.17 | 4 | CH_arhy_103 | 8 | 46 | 0.0000000000000180951 |
| Amborella trichopoda | AmTr_v1.0_scaffold00014 | 4 | CH_atr_145 | 3 | 5 | 0.00000529931 |
| Carica papaya | supercontig_12 | 4 | CH_cpa_85 | 3 | 3 | 0.00000113879 |
| Eucalyptus grandis | Chr06 | 4 | CH_egr_743 | 3 | 18 | 0.000146494 |
| Lonicera japonica | GWHAAZE00000001 | 4 | CH_lonja_578 | 3 | 18 | 0.000722077 |
| Nicotiana tabacum | Nitab4.5_0000168 | 4 | CH_nta_125 | 3 | 17 | 0.000428535 |
| Salvia bowleyana | GWHASIU00000004 | 4 | CH_sbo_517 | 2 | 2 | 0.000955457 |
| Sequoiadendron giganteum | chr10 | 4 | CH_sgi_747 | 3 | 4 | 0.00000170846 |
| Vitis vinifera | chr19 | 4 | CH_vvi_387 | 3 | 23 | 0.000536314 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |