Functional clusters
Information
- Type Gene Ontology
- Description intracellular cholesterol transport
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Avicennia marina | ScioBoG_102835_HRSCAF_103059 | 3 | CH_ama_58 | 2 | 2 | 0.0000862218 |
| Aquilegia oxysepala | CHR03 | 3 | CH_aox_67 | 3 | 3 | 0.0000000385927 |
| Amborella trichopoda | AmTr_v1.0_scaffold00007 | 3 | CH_atr_201 | 2 | 2 | 0.0000794407 |
| Brassica carinata | ChrC03 | 3 | CH_bca_337 | 3 | 8 | 0.00000134317 |
| Ceratophyllum demersum | 7 | 3 | CH_cde_179 | 2 | 2 | 0.000473878 |
| Davidia involucrata | GWHABJS00000014 | 3 | CH_din_364 | 2 | 2 | 0.000500125 |
| Davidia involucrata | GWHABJS00000012 | 3 | CH_din_365 | 2 | 2 | 0.000500125 |
| Magnolia biondii | Chr16 | 3 | CH_mbi_174 | 3 | 5 | 0.0000000353791 |
| Malus domestica | Chr17 | 3 | CH_mdo_256 | 3 | 8 | 0.000000483102 |
| Quercus lobata | 4 | 3 | CH_qlo_904 | 2 | 2 | 0.000309773 |
| Rosa chinensis | RcHm_v2.0_Chr3 | 3 | CH_rch_198 | 3 | 3 | 0.00000000238391 |
| Solanum lycopersicum | SL4.0ch02 | 3 | CH_sly_343 | 2 | 2 | 0.0000586941 |
| Trifolium pratense | Tp57577_TGAC_v2_LG2 | 3 | CH_tpr_275 | 2 | 2 | 0.000227092 |
| Zea mays | 8 | 3 | CH_zma_190 | 2 | 2 | 0.0000511313 |
| Avicennia marina | ScioBoG_102835_HRSCAF_103059 | 4 | CH_ama_58 | 2 | 2 | 0.0000862218 |
| Aquilegia oxysepala | CHR03 | 4 | CH_aox_67 | 3 | 3 | 0.0000000385927 |
| Amborella trichopoda | AmTr_v1.0_scaffold00007 | 4 | CH_atr_201 | 2 | 2 | 0.0000794407 |
| Brassica carinata | ChrC03 | 4 | CH_bca_337 | 3 | 8 | 0.00000134317 |
| Ceratophyllum demersum | 7 | 4 | CH_cde_179 | 2 | 2 | 0.000473878 |
| Davidia involucrata | GWHABJS00000014 | 4 | CH_din_364 | 2 | 2 | 0.000500125 |
| Davidia involucrata | GWHABJS00000012 | 4 | CH_din_365 | 2 | 2 | 0.000500125 |
| Magnolia biondii | Chr16 | 4 | CH_mbi_174 | 3 | 5 | 0.0000000353791 |
| Malus domestica | Chr17 | 4 | CH_mdo_256 | 3 | 8 | 0.000000483102 |
| Quercus lobata | 4 | 4 | CH_qlo_904 | 2 | 2 | 0.000309773 |
| Rosa chinensis | RcHm_v2.0_Chr3 | 4 | CH_rch_198 | 3 | 3 | 0.00000000238391 |
| Solanum lycopersicum | SL4.0ch02 | 4 | CH_sly_343 | 2 | 2 | 0.0000586941 |
| Trifolium pratense | Tp57577_TGAC_v2_LG2 | 4 | CH_tpr_275 | 2 | 2 | 0.000227092 |
| Zea mays | 8 | 4 | CH_zma_190 | 2 | 2 | 0.0000511313 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |