Functional clusters

Information

  • Type Gene Ontology
  • Description intracellular cholesterol transport

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Avicennia marina ScioBoG_102835_HRSCAF_103059 3 CH_ama_58 2 2 0.0000862218
Aquilegia oxysepala CHR03 3 CH_aox_67 3 3 0.0000000385927
Amborella trichopoda AmTr_v1.0_scaffold00007 3 CH_atr_201 2 2 0.0000794407
Brassica carinata ChrC03 3 CH_bca_337 3 8 0.00000134317
Ceratophyllum demersum 7 3 CH_cde_179 2 2 0.000473878
Davidia involucrata GWHABJS00000014 3 CH_din_364 2 2 0.000500125
Davidia involucrata GWHABJS00000012 3 CH_din_365 2 2 0.000500125
Magnolia biondii Chr16 3 CH_mbi_174 3 5 0.0000000353791
Malus domestica Chr17 3 CH_mdo_256 3 8 0.000000483102
Quercus lobata 4 3 CH_qlo_904 2 2 0.000309773
Rosa chinensis RcHm_v2.0_Chr3 3 CH_rch_198 3 3 0.00000000238391
Solanum lycopersicum SL4.0ch02 3 CH_sly_343 2 2 0.0000586941
Trifolium pratense Tp57577_TGAC_v2_LG2 3 CH_tpr_275 2 2 0.000227092
Zea mays 8 3 CH_zma_190 2 2 0.0000511313
Avicennia marina ScioBoG_102835_HRSCAF_103059 4 CH_ama_58 2 2 0.0000862218
Aquilegia oxysepala CHR03 4 CH_aox_67 3 3 0.0000000385927
Amborella trichopoda AmTr_v1.0_scaffold00007 4 CH_atr_201 2 2 0.0000794407
Brassica carinata ChrC03 4 CH_bca_337 3 8 0.00000134317
Ceratophyllum demersum 7 4 CH_cde_179 2 2 0.000473878
Davidia involucrata GWHABJS00000014 4 CH_din_364 2 2 0.000500125
Davidia involucrata GWHABJS00000012 4 CH_din_365 2 2 0.000500125
Magnolia biondii Chr16 4 CH_mbi_174 3 5 0.0000000353791
Malus domestica Chr17 4 CH_mdo_256 3 8 0.000000483102
Quercus lobata 4 4 CH_qlo_904 2 2 0.000309773
Rosa chinensis RcHm_v2.0_Chr3 4 CH_rch_198 3 3 0.00000000238391
Solanum lycopersicum SL4.0ch02 4 CH_sly_343 2 2 0.0000586941
Trifolium pratense Tp57577_TGAC_v2_LG2 4 CH_tpr_275 2 2 0.000227092
Zea mays 8 4 CH_zma_190 2 2 0.0000511313

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001