Functional clusters
Information
- Type Gene Ontology
- Description mismatch repair complex
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Camellia sinensis var. sinensis | Chr2 | 3 | CH_camsi_373 | 3 | 5 | 0.00000264874 |
Citrullus lanatus | CG_Chr08 | 3 | CH_cla_176 | 2 | 3 | 0.000887115 |
Capsella rubella | scaffold_7 | 3 | CH_cru_336 | 2 | 2 | 0.000731154 |
Daucus carota | DCARv2_Chr5 | 3 | CH_dca_389 | 2 | 2 | 0.000637775 |
Gossypium hirsutum | A12 | 3 | CH_ghi_706 | 2 | 2 | 0.000961256 |
Lupinus albus | Lalb_Chr16 | 3 | CH_lal_120 | 3 | 3 | 0.000000231376 |
Malus domestica | Chr15 | 3 | CH_mdo_714 | 2 | 2 | 0.000796344 |
Olea europaea | scaffold1435 | 3 | CH_oeu_365 | 2 | 2 | 0.000800683 |
Sequoiadendron giganteum | chr2 | 3 | CH_sgi_551 | 3 | 3 | 0.0000000355983 |
Sapria himalayana | scaffold32_6892495 | 3 | CH_shi_23 | 4 | 4 | 0.0000000000392644 |
Trochodendron aralioides | group8 | 3 | CH_tar_498 | 2 | 2 | 0.000900549 |
Trochodendron aralioides | group5 | 3 | CH_tar_499 | 2 | 2 | 0.000900549 |
Vanilla planifolia | CM028151.1 | 3 | CH_vpl_360 | 2 | 2 | 0.00073888 |
Camellia sinensis var. sinensis | Chr2 | 4 | CH_camsi_373 | 3 | 5 | 0.00000264874 |
Citrullus lanatus | CG_Chr08 | 4 | CH_cla_176 | 2 | 3 | 0.000887115 |
Capsella rubella | scaffold_7 | 4 | CH_cru_336 | 2 | 2 | 0.000731154 |
Daucus carota | DCARv2_Chr5 | 4 | CH_dca_389 | 2 | 2 | 0.000637775 |
Gossypium hirsutum | A12 | 4 | CH_ghi_706 | 2 | 2 | 0.000961256 |
Lupinus albus | Lalb_Chr16 | 4 | CH_lal_120 | 3 | 3 | 0.000000231376 |
Malus domestica | Chr15 | 4 | CH_mdo_714 | 2 | 2 | 0.000796344 |
Olea europaea | scaffold1435 | 4 | CH_oeu_365 | 2 | 2 | 0.000800683 |
Sequoiadendron giganteum | chr2 | 4 | CH_sgi_551 | 3 | 3 | 0.0000000355983 |
Sapria himalayana | scaffold32_6892495 | 4 | CH_shi_23 | 4 | 4 | 0.0000000000392644 |
Trochodendron aralioides | group8 | 4 | CH_tar_498 | 2 | 2 | 0.000900549 |
Trochodendron aralioides | group5 | 4 | CH_tar_499 | 2 | 2 | 0.000900549 |
Vanilla planifolia | CM028151.1 | 4 | CH_vpl_360 | 2 | 2 | 0.00073888 |
Functional Clusters Experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |