Functional clusters

Information

  • Type Gene Ontology
  • Description methylation

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Brassica carinata ChrC05 3 CH_bca_577 4 4 0.0000760093
Fragaria x ananassa Fvb1-2 3 CH_fan_519 6 24 0.00065336
Brassica carinata ChrC05 4 CH_bca_577 4 4 0.0000760093
Fragaria x ananassa Fvb1-2 4 CH_fan_519 6 24 0.00065336

Available child term results

Ontology identifier Description Number of clusters
GO:0000453 enzyme-directed rRNA 2'-O-methylation 2
GO:0001510 RNA methylation 4
GO:0002940 tRNA N2-guanine methylation 2
GO:0006479 protein methylation 2
GO:0006480 N-terminal protein amino acid methylation 10
GO:0010425 DNA methylation on cytosine within a CNG sequence 4
GO:0010426 DNA methylation on cytosine within a CHH sequence 8
GO:0018023 peptidyl-lysine trimethylation 2
GO:0030488 tRNA methylation 2
GO:0032776 DNA methylation on cytosine 2
GO:0034968 histone lysine methylation 2
GO:0034970 histone H3-R2 methylation 2
GO:0035246 peptidyl-arginine N-methylation 2
GO:0036123 histone H3-K9 dimethylation 2
GO:0036265 RNA (guanine-N7)-methylation 4
GO:0043985 histone H4-R3 methylation 2
GO:0044030 regulation of DNA methylation 6
GO:0051571 positive regulation of histone H3-K4 methylation 8
GO:0051572 negative regulation of histone H3-K4 methylation 2
GO:0051573 negative regulation of histone H3-K9 methylation 2
GO:0061715 miRNA 2'-O-methylation 6
GO:0080009 mRNA methylation 12
GO:0080178 5-carbamoylmethyl uridine residue modification 2
GO:0090116 C-5 methylation of cytosine 4
GO:0098532 histone H3-K27 trimethylation 4
GO:0106005 RNA 5'-cap (guanine-N7)-methylation 2
GO:1900109 regulation of histone H3-K9 dimethylation 4
GO:1902464 regulation of histone H3-K27 trimethylation 8
GO:1902466 positive regulation of histone H3-K27 trimethylation 2
GO:1905435 regulation of histone H3-K4 trimethylation 4
GO:1905642 negative regulation of DNA methylation 10
GO:2001253 regulation of histone H3-K36 trimethylation 2

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001