Functional clusters
Information
- Type Gene Ontology
- Description integrator complex
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Acer truncatum | chr11 | 3 | CH_acertr_489 | 3 | 31 | 0.000668058 |
Aquilegia oxysepala | CHR05 | 3 | CH_aox_137 | 3 | 7 | 0.0000118114 |
Brassica carinata | ChrC01 | 3 | CH_bca_936 | 2 | 4 | 0.000769513 |
Camellia sinensis var. sinensis | Chr8 | 3 | CH_camsi_519 | 2 | 2 | 0.0000458547 |
Cicer arietinum L. | Ca_LG5_v3 | 3 | CH_car_62 | 3 | 7 | 0.00000635743 |
Ceratophyllum demersum | 2 | 3 | CH_cde_37 | 3 | 3 | 0.0000000374281 |
Carica papaya | supercontig_96 | 3 | CH_cpa_285 | 2 | 3 | 0.000855527 |
Daucus carota | DCARv2_Chr3 | 3 | CH_dca_367 | 2 | 3 | 0.000573967 |
Eucalyptus grandis | Chr08 | 3 | CH_egr_518 | 3 | 8 | 0.00000115069 |
Gossypium hirsutum | A06 | 3 | CH_ghi_539 | 2 | 2 | 0.000267016 |
Hydrangea macrophylla | Hma1.2p1_0286F.1 | 3 | CH_hma_267 | 2 | 2 | 0.000333259 |
Lotus japonicus | Contig00564 | 3 | CH_lja_127 | 3 | 5 | 0.000000766894 |
Malus domestica | Chr00 | 3 | CH_mdo_649 | 2 | 2 | 0.000568817 |
Malus domestica | Chr07 | 3 | CH_mdo_650 | 2 | 2 | 0.000568817 |
Medicago truncatula | chr3 | 3 | CH_mtr_572 | 2 | 2 | 0.000123259 |
Olea europaea | chr11 | 3 | CH_oeu_313 | 2 | 3 | 0.000480389 |
Petunia axillaris | Peaxi162Scf00449 | 3 | CH_pax_267 | 2 | 2 | 0.000211067 |
Phaseolus vulgaris | Chr05 | 3 | CH_pvu_113 | 3 | 3 | 0.0000000809765 |
Quercus lobata | 4 | 3 | CH_qlo_757 | 3 | 49 | 0.0000735794 |
Sequoiadendron giganteum | chr2 | 3 | CH_sgi_611 | 3 | 3 | 0.000000124594 |
Sapria himalayana | scaffold54_3822261 | 3 | CH_shi_40 | 3 | 3 | 0.00000000490454 |
Solanum lycopersicum | SL4.0ch02 | 3 | CH_sly_446 | 2 | 2 | 0.000176082 |
Acer truncatum | chr11 | 4 | CH_acertr_489 | 3 | 31 | 0.000668058 |
Aquilegia oxysepala | CHR05 | 4 | CH_aox_137 | 3 | 7 | 0.0000118114 |
Brassica carinata | ChrC01 | 4 | CH_bca_936 | 2 | 4 | 0.000769513 |
Camellia sinensis var. sinensis | Chr8 | 4 | CH_camsi_519 | 2 | 2 | 0.0000458547 |
Cicer arietinum L. | Ca_LG5_v3 | 4 | CH_car_62 | 3 | 7 | 0.00000635743 |
Ceratophyllum demersum | 2 | 4 | CH_cde_37 | 3 | 3 | 0.0000000374281 |
Carica papaya | supercontig_96 | 4 | CH_cpa_285 | 2 | 3 | 0.000855527 |
Daucus carota | DCARv2_Chr3 | 4 | CH_dca_367 | 2 | 3 | 0.000573967 |
Eucalyptus grandis | Chr08 | 4 | CH_egr_518 | 3 | 8 | 0.00000115069 |
Gossypium hirsutum | A06 | 4 | CH_ghi_539 | 2 | 2 | 0.000267016 |
Hydrangea macrophylla | Hma1.2p1_0286F.1 | 4 | CH_hma_267 | 2 | 2 | 0.000333259 |
Lotus japonicus | Contig00564 | 4 | CH_lja_127 | 3 | 5 | 0.000000766894 |
Malus domestica | Chr00 | 4 | CH_mdo_649 | 2 | 2 | 0.000568817 |
Malus domestica | Chr07 | 4 | CH_mdo_650 | 2 | 2 | 0.000568817 |
Medicago truncatula | chr3 | 4 | CH_mtr_572 | 2 | 2 | 0.000123259 |
Olea europaea | chr11 | 4 | CH_oeu_313 | 2 | 3 | 0.000480389 |
Petunia axillaris | Peaxi162Scf00449 | 4 | CH_pax_267 | 2 | 2 | 0.000211067 |
Phaseolus vulgaris | Chr05 | 4 | CH_pvu_113 | 3 | 3 | 0.0000000809765 |
Quercus lobata | 4 | 4 | CH_qlo_757 | 3 | 49 | 0.0000735794 |
Sequoiadendron giganteum | chr2 | 4 | CH_sgi_611 | 3 | 3 | 0.000000124594 |
Sapria himalayana | scaffold54_3822261 | 4 | CH_shi_40 | 3 | 3 | 0.00000000490454 |
Solanum lycopersicum | SL4.0ch02 | 4 | CH_sly_446 | 2 | 2 | 0.000176082 |
Functional Clusters Experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |