Functional clusters
Information
- Type Gene Ontology
- Description chromatin DNA binding
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Arabidopsis lyrata | scaffold_1 | 3 | CH_aly_73 | 4 | 5 | 0.0000000167129 |
| Aquilegia oxysepala | CHR01 | 3 | CH_aox_60 | 5 | 13 | 0.000000016885 |
| Arabidopsis thaliana | Chr1 | 3 | CH_ath_178 | 4 | 7 | 0.000000334713 |
| Brassica napus | C05 | 3 | CH_bna_184 | 4 | 7 | 0.000000109475 |
| Brassica napus | A06 | 3 | CH_bna_47 | 6 | 9 | 0.0000000000000389719 |
| Brassica oleracea | C5 | 3 | CH_bol_193 | 3 | 3 | 0.00000416677 |
| Corylus avellana | 11 | 3 | CH_cav_119 | 4 | 7 | 0.000000282775 |
| Citrus clementina | scaffold_7 | 3 | CH_ccl_209 | 4 | 9 | 0.0000010082 |
| Cardamine hirsuta | Chr1 | 3 | CH_chi_86 | 4 | 4 | 0.00000000480042 |
| Carya illinoinensis | Chr02 | 3 | CH_cil_148 | 5 | 9 | 0.00000000165241 |
| Citrullus lanatus | CG_Chr09 | 3 | CH_cla_50 | 4 | 7 | 0.000000437932 |
| Capsella rubella | scaffold_1 | 3 | CH_cru_175 | 3 | 3 | 0.0000077705 |
| Durio zibethinus | NW_019167982.1 | 3 | CH_dzi_27 | 6 | 7 | 0.0000000000000126887 |
| Eucalyptus grandis | Chr10 | 3 | CH_egr_647 | 3 | 4 | 0.0000316381 |
| Fragaria x ananassa | Fvb3-3 | 3 | CH_fan_533 | 3 | 7 | 0.000678689 |
| Gossypium hirsutum | A05 | 3 | CH_ghi_166 | 4 | 4 | 0.00000000233714 |
| Helianthus annuus | HanXRQChr03 | 3 | CH_han_37 | 7 | 7 | 1.76382e-18 |
| Hydrangea macrophylla | Hma1.2p1_0233F.1 | 3 | CH_hma_82 | 3 | 3 | 0.000000647896 |
| Lonicera japonica | GWHAAZE00000007 | 3 | CH_lonja_318 | 3 | 3 | 0.00000521314 |
| Lactuca sativa | Lsat_1_v8_lg_5 | 3 | CH_lsa_21 | 8 | 8 | 1.74864e-21 |
| Malus domestica | Chr02 | 3 | CH_mdo_217 | 4 | 5 | 0.00000015906 |
| Malus domestica | Chr03 | 3 | CH_mdo_6 | 14 | 31 | 4.5229e-31 |
| Medicago truncatula | chr2 | 3 | CH_mtr_161 | 5 | 7 | 0.0000000000903049 |
| Olea europaea | chr3 | 3 | CH_oeu_144 | 3 | 4 | 0.0000393031 |
| Prunus persica | Pp06 | 3 | CH_ppe_61 | 6 | 6 | 0.0000000000000069978 |
| Pisum sativum | chr7LG7 | 3 | CH_psa_68 | 4 | 4 | 0.0000000116704 |
| Populus trichocarpa | Chr03 | 3 | CH_ptr_18 | 12 | 34 | 2.54233e-24 |
| Quercus lobata | 5 | 3 | CH_qlo_159 | 10 | 78 | 0.0000000000000146707 |
| Rosa chinensis | RcHm_v2.0_Chr5 | 3 | CH_rch_16 | 11 | 17 | 1.69007e-28 |
| Sechium edule | LG10 | 3 | CH_sed_65 | 4 | 4 | 0.00000000964697 |
| Solanum lycopersicum | SL4.0ch04 | 3 | CH_sly_259 | 5 | 24 | 0.00000508607 |
| Solanum lycopersicum | SL4.0ch04 | 3 | CH_sly_479 | 3 | 4 | 0.000313473 |
| Schrenkiella parvula | ch1-1 | 3 | CH_spa_90 | 3 | 3 | 0.00000901065 |
| Solanum tuberosum | ST4.03ch04 | 3 | CH_stu_98 | 6 | 9 | 0.00000000000470399 |
| Trochodendron aralioides | group2 | 3 | CH_tar_88 | 4 | 4 | 0.00000000689889 |
| Theobroma cacao | Chromosome_6 | 3 | CH_tca_238 | 3 | 4 | 0.0000262508 |
| Vaccinium macrocarpon | chr10_Vaccinium_macrocarpon_Stevens_v1 | 3 | CH_vma_178 | 3 | 3 | 0.0000199474 |
| Vitis vinifera | chrUn | 3 | CH_vvi_298 | 3 | 3 | 0.000140725 |
| Vitis vinifera | chr9 | 3 | CH_vvi_391 | 3 | 4 | 0.000562172 |
| Vitis vinifera | chr13_random | 3 | CH_vvi_60 | 7 | 10 | 0.00000000000011469 |
| Arabidopsis lyrata | scaffold_1 | 4 | CH_aly_73 | 4 | 5 | 0.0000000167129 |
| Aquilegia oxysepala | CHR01 | 4 | CH_aox_60 | 5 | 13 | 0.000000016885 |
| Arabidopsis thaliana | Chr1 | 4 | CH_ath_178 | 4 | 7 | 0.000000334713 |
| Brassica napus | C05 | 4 | CH_bna_184 | 4 | 7 | 0.000000109475 |
| Brassica napus | A06 | 4 | CH_bna_47 | 6 | 9 | 0.0000000000000389719 |
| Brassica oleracea | C5 | 4 | CH_bol_193 | 3 | 3 | 0.00000416677 |
| Corylus avellana | 11 | 4 | CH_cav_119 | 4 | 7 | 0.000000282775 |
| Citrus clementina | scaffold_7 | 4 | CH_ccl_209 | 4 | 9 | 0.0000010082 |
| Cardamine hirsuta | Chr1 | 4 | CH_chi_86 | 4 | 4 | 0.00000000480042 |
| Carya illinoinensis | Chr02 | 4 | CH_cil_148 | 5 | 9 | 0.00000000165241 |
| Citrullus lanatus | CG_Chr09 | 4 | CH_cla_50 | 4 | 7 | 0.000000437932 |
| Capsella rubella | scaffold_1 | 4 | CH_cru_175 | 3 | 3 | 0.0000077705 |
| Durio zibethinus | NW_019167982.1 | 4 | CH_dzi_27 | 6 | 7 | 0.0000000000000126887 |
| Eucalyptus grandis | Chr10 | 4 | CH_egr_647 | 3 | 4 | 0.0000316381 |
| Fragaria x ananassa | Fvb3-3 | 4 | CH_fan_533 | 3 | 7 | 0.000678689 |
| Gossypium hirsutum | A05 | 4 | CH_ghi_166 | 4 | 4 | 0.00000000233714 |
| Helianthus annuus | HanXRQChr03 | 4 | CH_han_37 | 7 | 7 | 1.76382e-18 |
| Hydrangea macrophylla | Hma1.2p1_0233F.1 | 4 | CH_hma_82 | 3 | 3 | 0.000000647896 |
| Lonicera japonica | GWHAAZE00000007 | 4 | CH_lonja_318 | 3 | 3 | 0.00000521314 |
| Lactuca sativa | Lsat_1_v8_lg_5 | 4 | CH_lsa_21 | 8 | 8 | 1.74864e-21 |
| Malus domestica | Chr02 | 4 | CH_mdo_217 | 4 | 5 | 0.00000015906 |
| Malus domestica | Chr03 | 4 | CH_mdo_6 | 14 | 31 | 4.5229e-31 |
| Medicago truncatula | chr2 | 4 | CH_mtr_161 | 5 | 7 | 0.0000000000903049 |
| Olea europaea | chr3 | 4 | CH_oeu_144 | 3 | 4 | 0.0000393031 |
| Prunus persica | Pp06 | 4 | CH_ppe_61 | 6 | 6 | 0.0000000000000069978 |
| Pisum sativum | chr7LG7 | 4 | CH_psa_68 | 4 | 4 | 0.0000000116704 |
| Populus trichocarpa | Chr03 | 4 | CH_ptr_18 | 12 | 34 | 2.54233e-24 |
| Quercus lobata | 5 | 4 | CH_qlo_159 | 10 | 78 | 0.0000000000000146707 |
| Rosa chinensis | RcHm_v2.0_Chr5 | 4 | CH_rch_16 | 11 | 17 | 1.69007e-28 |
| Sechium edule | LG10 | 4 | CH_sed_65 | 4 | 4 | 0.00000000964697 |
| Solanum lycopersicum | SL4.0ch04 | 4 | CH_sly_259 | 5 | 24 | 0.00000508607 |
| Solanum lycopersicum | SL4.0ch04 | 4 | CH_sly_479 | 3 | 4 | 0.000313473 |
| Schrenkiella parvula | ch1-1 | 4 | CH_spa_90 | 3 | 3 | 0.00000901065 |
| Solanum tuberosum | ST4.03ch04 | 4 | CH_stu_98 | 6 | 9 | 0.00000000000470399 |
| Trochodendron aralioides | group2 | 4 | CH_tar_88 | 4 | 4 | 0.00000000689889 |
| Theobroma cacao | Chromosome_6 | 4 | CH_tca_238 | 3 | 4 | 0.0000262508 |
| Vaccinium macrocarpon | chr10_Vaccinium_macrocarpon_Stevens_v1 | 4 | CH_vma_178 | 3 | 3 | 0.0000199474 |
| Vitis vinifera | chrUn | 4 | CH_vvi_298 | 3 | 3 | 0.000140725 |
| Vitis vinifera | chr9 | 4 | CH_vvi_391 | 3 | 4 | 0.000562172 |
| Vitis vinifera | chr13_random | 4 | CH_vvi_60 | 7 | 10 | 0.00000000000011469 |
Available child term results
| Ontology identifier | Description | Number of clusters |
|---|---|---|
| GO:0031492 | nucleosomal DNA binding | 2 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |