Functional clusters

Information

  • Type Gene Ontology
  • Description L-ascorbic acid binding

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Brassica napus A01 3 CH_bna_340 3 3 0.0000128189
Brassica napus C01 3 CH_bna_341 3 3 0.0000128189
Brassica rapa A01 3 CH_bra_140 3 3 0.00000808678
Cucumis melo chr05 3 CH_cme_123 3 3 0.00000242999
Capsella rubella scaffold_1 3 CH_cru_177 3 3 0.00000914177
Lupinus albus Lalb_Chr03 3 CH_lal_189 3 3 0.00000731727
Medicago truncatula chr3 3 CH_mtr_466 3 5 0.0000336579
Medicago truncatula chr8 3 CH_mtr_98 5 5 0.000000000000434958
Pisum sativum chr2LG1 3 CH_psa_147 3 3 0.00000277552
Papaver somniferum NW_020625486.1 3 CH_pso_63 8 50 0.0000000000000115911
Solanum lycopersicum SL4.0ch09 3 CH_sly_302 6 27 0.0000204274
Solanum lycopersicum SL4.0ch06 3 CH_sly_556 4 9 0.000730226
Solanum tuberosum ST4.03ch03 3 CH_stu_219 5 6 0.000000315164
Solanum tuberosum ST4.03ch09 3 CH_stu_255 5 7 0.00000109923
Solanum tuberosum ST4.03ch09 3 CH_stu_6 17 19 1.63395e-35
Solanum tuberosum ST4.03ch02 3 CH_stu_67 9 13 0.0000000000000106272
Brassica napus A01 4 CH_bna_340 3 3 0.0000128189
Brassica napus C01 4 CH_bna_341 3 3 0.0000128189
Brassica rapa A01 4 CH_bra_140 3 3 0.00000808678
Cucumis melo chr05 4 CH_cme_123 3 3 0.00000242999
Capsella rubella scaffold_1 4 CH_cru_177 3 3 0.00000914177
Lupinus albus Lalb_Chr03 4 CH_lal_189 3 3 0.00000731727
Medicago truncatula chr3 4 CH_mtr_466 3 5 0.0000336579
Medicago truncatula chr8 4 CH_mtr_98 5 5 0.000000000000434958
Pisum sativum chr2LG1 4 CH_psa_147 3 3 0.00000277552
Papaver somniferum NW_020625486.1 4 CH_pso_63 8 50 0.0000000000000115911
Solanum lycopersicum SL4.0ch09 4 CH_sly_302 6 27 0.0000204274
Solanum lycopersicum SL4.0ch06 4 CH_sly_556 4 9 0.000730226
Solanum tuberosum ST4.03ch03 4 CH_stu_219 5 6 0.000000315164
Solanum tuberosum ST4.03ch09 4 CH_stu_255 5 7 0.00000109923
Solanum tuberosum ST4.03ch09 4 CH_stu_6 17 19 1.63395e-35
Solanum tuberosum ST4.03ch02 4 CH_stu_67 9 13 0.0000000000000106272

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001