Functional clusters
Information
- Type Gene Ontology
- Description L-ascorbic acid binding
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Brassica napus | A01 | 3 | CH_bna_340 | 3 | 3 | 0.0000128189 |
| Brassica napus | C01 | 3 | CH_bna_341 | 3 | 3 | 0.0000128189 |
| Brassica rapa | A01 | 3 | CH_bra_140 | 3 | 3 | 0.00000808678 |
| Cucumis melo | chr05 | 3 | CH_cme_123 | 3 | 3 | 0.00000242999 |
| Capsella rubella | scaffold_1 | 3 | CH_cru_177 | 3 | 3 | 0.00000914177 |
| Lupinus albus | Lalb_Chr03 | 3 | CH_lal_189 | 3 | 3 | 0.00000731727 |
| Medicago truncatula | chr3 | 3 | CH_mtr_466 | 3 | 5 | 0.0000336579 |
| Medicago truncatula | chr8 | 3 | CH_mtr_98 | 5 | 5 | 0.000000000000434958 |
| Pisum sativum | chr2LG1 | 3 | CH_psa_147 | 3 | 3 | 0.00000277552 |
| Papaver somniferum | NW_020625486.1 | 3 | CH_pso_63 | 8 | 50 | 0.0000000000000115911 |
| Solanum lycopersicum | SL4.0ch09 | 3 | CH_sly_302 | 6 | 27 | 0.0000204274 |
| Solanum lycopersicum | SL4.0ch06 | 3 | CH_sly_556 | 4 | 9 | 0.000730226 |
| Solanum tuberosum | ST4.03ch03 | 3 | CH_stu_219 | 5 | 6 | 0.000000315164 |
| Solanum tuberosum | ST4.03ch09 | 3 | CH_stu_255 | 5 | 7 | 0.00000109923 |
| Solanum tuberosum | ST4.03ch09 | 3 | CH_stu_6 | 17 | 19 | 1.63395e-35 |
| Solanum tuberosum | ST4.03ch02 | 3 | CH_stu_67 | 9 | 13 | 0.0000000000000106272 |
| Brassica napus | A01 | 4 | CH_bna_340 | 3 | 3 | 0.0000128189 |
| Brassica napus | C01 | 4 | CH_bna_341 | 3 | 3 | 0.0000128189 |
| Brassica rapa | A01 | 4 | CH_bra_140 | 3 | 3 | 0.00000808678 |
| Cucumis melo | chr05 | 4 | CH_cme_123 | 3 | 3 | 0.00000242999 |
| Capsella rubella | scaffold_1 | 4 | CH_cru_177 | 3 | 3 | 0.00000914177 |
| Lupinus albus | Lalb_Chr03 | 4 | CH_lal_189 | 3 | 3 | 0.00000731727 |
| Medicago truncatula | chr3 | 4 | CH_mtr_466 | 3 | 5 | 0.0000336579 |
| Medicago truncatula | chr8 | 4 | CH_mtr_98 | 5 | 5 | 0.000000000000434958 |
| Pisum sativum | chr2LG1 | 4 | CH_psa_147 | 3 | 3 | 0.00000277552 |
| Papaver somniferum | NW_020625486.1 | 4 | CH_pso_63 | 8 | 50 | 0.0000000000000115911 |
| Solanum lycopersicum | SL4.0ch09 | 4 | CH_sly_302 | 6 | 27 | 0.0000204274 |
| Solanum lycopersicum | SL4.0ch06 | 4 | CH_sly_556 | 4 | 9 | 0.000730226 |
| Solanum tuberosum | ST4.03ch03 | 4 | CH_stu_219 | 5 | 6 | 0.000000315164 |
| Solanum tuberosum | ST4.03ch09 | 4 | CH_stu_255 | 5 | 7 | 0.00000109923 |
| Solanum tuberosum | ST4.03ch09 | 4 | CH_stu_6 | 17 | 19 | 1.63395e-35 |
| Solanum tuberosum | ST4.03ch02 | 4 | CH_stu_67 | 9 | 13 | 0.0000000000000106272 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |