Functional clusters

Information

  • Type Gene Ontology
  • Description Ctf18 RFC-like complex

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr5 3 CH_acertr_511 2 2 0.00070497
Capsicum annuum PGAv.1.6.scaffold74 3 CH_can_471 2 2 0.000826105
Capsicum annuum PGAv.1.6.scaffold195 3 CH_can_472 2 2 0.000826105
Davidia involucrata GWHABJS00000016 3 CH_din_244 2 2 0.0000500125
Olea europaea chr15 3 CH_oeu_240 2 2 0.000160137
Punica granatum NC_045131.1 3 CH_pgr_370 2 3 0.000675279
Prunus persica Pp02 3 CH_ppe_183 3 3 0.0000000333888
Vitis vinifera chr15 3 CH_vvi_341 2 2 0.000228189
Zea mays 2 3 CH_zma_239 2 2 0.000153394
Acer truncatum chr5 4 CH_acertr_511 2 2 0.00070497
Capsicum annuum PGAv.1.6.scaffold74 4 CH_can_471 2 2 0.000826105
Capsicum annuum PGAv.1.6.scaffold195 4 CH_can_472 2 2 0.000826105
Davidia involucrata GWHABJS00000016 4 CH_din_244 2 2 0.0000500125
Olea europaea chr15 4 CH_oeu_240 2 2 0.000160137
Punica granatum NC_045131.1 4 CH_pgr_370 2 3 0.000675279
Prunus persica Pp02 4 CH_ppe_183 3 3 0.0000000333888
Vitis vinifera chr15 4 CH_vvi_341 2 2 0.000228189
Zea mays 2 4 CH_zma_239 2 2 0.000153394

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001