Functional clusters
Information
- Type Gene Ontology
- Description protein tag
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Acer truncatum | chr2 | 3 | CH_acertr_1 | 18 | 33 | 2.53366e-49 |
Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.17 | 3 | CH_arhy_577 | 2 | 2 | 0.000299383 |
Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.07 | 3 | CH_arhy_578 | 2 | 2 | 0.000299383 |
Arabidopsis thaliana | Chr1 | 3 | CH_ath_153 | 4 | 7 | 0.000000100932 |
Cardamine hirsuta | Chr8 | 3 | CH_chi_345 | 2 | 2 | 0.000414723 |
Chenopodium quinoa | C_Quinoa_Scaffold_1529 | 3 | CH_cqu_533 | 2 | 2 | 0.000710732 |
Capsella rubella | scaffold_8 | 3 | CH_cru_308 | 2 | 2 | 0.000438693 |
Erigeron canadensis | Conyza_canadensis_scaffold:5 | 3 | CH_eca_425 | 2 | 2 | 0.000448722 |
Eucalyptus grandis | Chr11 | 3 | CH_egr_770 | 2 | 2 | 0.000175582 |
Eutrema salsugineum | scaffold_2 | 3 | CH_esa_246 | 2 | 2 | 0.000456899 |
Lactuca sativa | Lsat_1_v8_lg_9 | 3 | CH_lsa_395 | 2 | 2 | 0.000154202 |
Medicago truncatula | chr3 | 3 | CH_mtr_495 | 2 | 2 | 0.0000410863 |
Olea europaea | chr21 | 3 | CH_oeu_342 | 2 | 2 | 0.000533789 |
Prunus persica | Pp04 | 3 | CH_ppe_192 | 3 | 3 | 0.0000000834721 |
Populus trichocarpa | Chr02 | 3 | CH_ptr_400 | 2 | 2 | 0.000346801 |
Striga asiatica | scaffold8 | 3 | CH_sas_62 | 2 | 2 | 0.0000625371 |
Salix brachista | GWHAAZH00000002 | 3 | CH_sbr_326 | 2 | 2 | 0.000378084 |
Solanum tuberosum | ST4.03ch10 | 3 | CH_stu_297 | 3 | 3 | 0.00000606639 |
Tarenaya hassleriana | NW_010966177.1 | 3 | CH_tha_189 | 2 | 2 | 0.00069847 |
Tripterygium wilfordii | NC_052250.1 | 3 | CH_twi_250 | 2 | 2 | 0.000167364 |
Utricularia gibba | unitig_747 | 3 | CH_ugi_132 | 2 | 2 | 0.000492287 |
Vitis vinifera | chrUn | 3 | CH_vvi_423 | 2 | 2 | 0.00076063 |
Acer truncatum | chr2 | 4 | CH_acertr_1 | 18 | 33 | 2.53366e-49 |
Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.17 | 4 | CH_arhy_577 | 2 | 2 | 0.000299383 |
Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.07 | 4 | CH_arhy_578 | 2 | 2 | 0.000299383 |
Arabidopsis thaliana | Chr1 | 4 | CH_ath_153 | 4 | 7 | 0.000000100932 |
Cardamine hirsuta | Chr8 | 4 | CH_chi_345 | 2 | 2 | 0.000414723 |
Chenopodium quinoa | C_Quinoa_Scaffold_1529 | 4 | CH_cqu_533 | 2 | 2 | 0.000710732 |
Capsella rubella | scaffold_8 | 4 | CH_cru_308 | 2 | 2 | 0.000438693 |
Erigeron canadensis | Conyza_canadensis_scaffold:5 | 4 | CH_eca_425 | 2 | 2 | 0.000448722 |
Eucalyptus grandis | Chr11 | 4 | CH_egr_770 | 2 | 2 | 0.000175582 |
Eutrema salsugineum | scaffold_2 | 4 | CH_esa_246 | 2 | 2 | 0.000456899 |
Lactuca sativa | Lsat_1_v8_lg_9 | 4 | CH_lsa_395 | 2 | 2 | 0.000154202 |
Medicago truncatula | chr3 | 4 | CH_mtr_495 | 2 | 2 | 0.0000410863 |
Olea europaea | chr21 | 4 | CH_oeu_342 | 2 | 2 | 0.000533789 |
Prunus persica | Pp04 | 4 | CH_ppe_192 | 3 | 3 | 0.0000000834721 |
Populus trichocarpa | Chr02 | 4 | CH_ptr_400 | 2 | 2 | 0.000346801 |
Striga asiatica | scaffold8 | 4 | CH_sas_62 | 2 | 2 | 0.0000625371 |
Salix brachista | GWHAAZH00000002 | 4 | CH_sbr_326 | 2 | 2 | 0.000378084 |
Solanum tuberosum | ST4.03ch10 | 4 | CH_stu_297 | 3 | 3 | 0.00000606639 |
Tarenaya hassleriana | NW_010966177.1 | 4 | CH_tha_189 | 2 | 2 | 0.00069847 |
Tripterygium wilfordii | NC_052250.1 | 4 | CH_twi_250 | 2 | 2 | 0.000167364 |
Utricularia gibba | unitig_747 | 4 | CH_ugi_132 | 2 | 2 | 0.000492287 |
Vitis vinifera | chrUn | 4 | CH_vvi_423 | 2 | 2 | 0.00076063 |
Functional Clusters Experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |