Functional clusters
Information
- Type Gene Ontology
- Description RSF complex
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Brassica carinata | ChrC07 | 3 | CH_bca_883 | 2 | 2 | 0.00059854 |
Brassica napus | A06 | 3 | CH_bna_643 | 2 | 2 | 0.00066822 |
Cardamine hirsuta | Chr2 | 3 | CH_chi_336 | 2 | 2 | 0.000414723 |
Daucus carota | DCARv2_B4 | 3 | CH_dca_385 | 2 | 2 | 0.000637775 |
Magnolia biondii | Chr01 | 3 | CH_mbi_607 | 2 | 2 | 0.000485661 |
Olea europaea | chr18 | 3 | CH_oeu_357 | 2 | 2 | 0.000800683 |
Olea europaea | scaffold1205 | 3 | CH_oeu_358 | 2 | 2 | 0.000800683 |
Physcomitrium patens | Chr02 | 3 | CH_ppa_174 | 2 | 2 | 0.000367636 |
Physcomitrium patens | Chr01 | 3 | CH_ppa_175 | 2 | 2 | 0.000367636 |
Salix brachista | GWHAAZH00000015 | 3 | CH_sbr_360 | 2 | 2 | 0.00063014 |
Sequoiadendron giganteum | chr2 | 3 | CH_sgi_1285 | 2 | 2 | 0.000487151 |
Sequoiadendron giganteum | chr10 | 3 | CH_sgi_1286 | 2 | 2 | 0.000487151 |
Sapria himalayana | scaffold4_21100006 | 3 | CH_shi_39 | 3 | 3 | 0.00000000490454 |
Trifolium pratense | Tp57577_TGAC_v2_LG7 | 3 | CH_tpr_285 | 2 | 2 | 0.000227092 |
Brassica carinata | ChrC07 | 4 | CH_bca_883 | 2 | 2 | 0.00059854 |
Brassica napus | A06 | 4 | CH_bna_643 | 2 | 2 | 0.00066822 |
Cardamine hirsuta | Chr2 | 4 | CH_chi_336 | 2 | 2 | 0.000414723 |
Daucus carota | DCARv2_B4 | 4 | CH_dca_385 | 2 | 2 | 0.000637775 |
Magnolia biondii | Chr01 | 4 | CH_mbi_607 | 2 | 2 | 0.000485661 |
Olea europaea | chr18 | 4 | CH_oeu_357 | 2 | 2 | 0.000800683 |
Olea europaea | scaffold1205 | 4 | CH_oeu_358 | 2 | 2 | 0.000800683 |
Physcomitrium patens | Chr02 | 4 | CH_ppa_174 | 2 | 2 | 0.000367636 |
Physcomitrium patens | Chr01 | 4 | CH_ppa_175 | 2 | 2 | 0.000367636 |
Salix brachista | GWHAAZH00000015 | 4 | CH_sbr_360 | 2 | 2 | 0.00063014 |
Sequoiadendron giganteum | chr2 | 4 | CH_sgi_1285 | 2 | 2 | 0.000487151 |
Sequoiadendron giganteum | chr10 | 4 | CH_sgi_1286 | 2 | 2 | 0.000487151 |
Sapria himalayana | scaffold4_21100006 | 4 | CH_shi_39 | 3 | 3 | 0.00000000490454 |
Trifolium pratense | Tp57577_TGAC_v2_LG7 | 4 | CH_tpr_285 | 2 | 2 | 0.000227092 |
Functional Clusters Experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |