Functional clusters

Information

  • Type Gene Ontology
  • Description chloroplast targeting sequence binding

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Manihot esculenta Chromosome15 3 CH_mes_273 2 2 0.0000610631
Physcomitrium patens Chr08 3 CH_ppa_20 3 4 0.000000022526
Populus trichocarpa Chr04 3 CH_ptr_322 2 2 0.0000578001
Quercus lobata 11 3 CH_qlo_957 2 5 0.000516249
Salix brachista GWHAAZH00000004 3 CH_sbr_242 2 2 0.000063014
Simmondsia chinensis GWHAASQ00000018 3 CH_sci_201 2 3 0.000255417
Sequoiadendron giganteum chr8 3 CH_sgi_1118 2 2 0.000146145
Selenicereus undatus Scaffold_33680 3 CH_sun_235 2 2 0.000726639
Manihot esculenta Chromosome15 4 CH_mes_273 2 2 0.0000610631
Physcomitrium patens Chr08 4 CH_ppa_20 3 4 0.000000022526
Populus trichocarpa Chr04 4 CH_ptr_322 2 2 0.0000578001
Quercus lobata 11 4 CH_qlo_957 2 5 0.000516249
Salix brachista GWHAAZH00000004 4 CH_sbr_242 2 2 0.000063014
Simmondsia chinensis GWHAASQ00000018 4 CH_sci_201 2 3 0.000255417
Sequoiadendron giganteum chr8 4 CH_sgi_1118 2 2 0.000146145
Selenicereus undatus Scaffold_33680 4 CH_sun_235 2 2 0.000726639

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001