Functional clusters
Information
- Type Gene Ontology
- Description Smc5-Smc6 complex
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Beta vulgaris | Chr7_EL10_PGA_scaffold5 | 3 | CH_bvu_32 | 6 | 14 | 0.000000000000787549 |
| Capsicum annuum | PGAv.1.6.scaffold649 | 3 | CH_can_257 | 3 | 6 | 0.0000245502 |
| Capsicum annuum | PGAv.1.6.scaffold362 | 3 | CH_can_268 | 3 | 7 | 0.0000429517 |
| Cicer arietinum L. | Ca_LG1_v3 | 3 | CH_car_56 | 3 | 4 | 0.00000203503 |
| Carica papaya | supercontig_121 | 3 | CH_cpa_122 | 3 | 7 | 0.0000151735 |
| Fragaria x ananassa | Fvb3-1 | 3 | CH_fan_323 | 3 | 5 | 0.0000335983 |
| Hydrangea macrophylla | Hma1.2p1_0685F.1 | 3 | CH_hma_79 | 3 | 3 | 0.000000647896 |
| Malus domestica | Chr10 | 3 | CH_mdo_253 | 3 | 3 | 0.000000474554 |
| Medicago truncatula | chr5 | 3 | CH_mtr_455 | 3 | 7 | 0.0000253294 |
| Sequoiadendron giganteum | chr6 | 3 | CH_sgi_694 | 3 | 3 | 0.000000587373 |
| Sapria himalayana | scaffold21_10161493 | 3 | CH_shi_172 | 3 | 11 | 0.0000678915 |
| Sapria himalayana | scaffold6_19132642 | 3 | CH_shi_75 | 3 | 5 | 0.000000411982 |
| Selenicereus undatus | Scaffold_10417 | 3 | CH_sun_85 | 3 | 8 | 0.0000372201 |
| Vitis vinifera | chr16 | 3 | CH_vvi_200 | 3 | 4 | 0.00000416478 |
| Beta vulgaris | Chr7_EL10_PGA_scaffold5 | 4 | CH_bvu_32 | 6 | 14 | 0.000000000000787549 |
| Capsicum annuum | PGAv.1.6.scaffold649 | 4 | CH_can_257 | 3 | 6 | 0.0000245502 |
| Capsicum annuum | PGAv.1.6.scaffold362 | 4 | CH_can_268 | 3 | 7 | 0.0000429517 |
| Cicer arietinum L. | Ca_LG1_v3 | 4 | CH_car_56 | 3 | 4 | 0.00000203503 |
| Carica papaya | supercontig_121 | 4 | CH_cpa_122 | 3 | 7 | 0.0000151735 |
| Fragaria x ananassa | Fvb3-1 | 4 | CH_fan_323 | 3 | 5 | 0.0000335983 |
| Hydrangea macrophylla | Hma1.2p1_0685F.1 | 4 | CH_hma_79 | 3 | 3 | 0.000000647896 |
| Malus domestica | Chr10 | 4 | CH_mdo_253 | 3 | 3 | 0.000000474554 |
| Medicago truncatula | chr5 | 4 | CH_mtr_455 | 3 | 7 | 0.0000253294 |
| Sequoiadendron giganteum | chr6 | 4 | CH_sgi_694 | 3 | 3 | 0.000000587373 |
| Sapria himalayana | scaffold21_10161493 | 4 | CH_shi_172 | 3 | 11 | 0.0000678915 |
| Sapria himalayana | scaffold6_19132642 | 4 | CH_shi_75 | 3 | 5 | 0.000000411982 |
| Selenicereus undatus | Scaffold_10417 | 4 | CH_sun_85 | 3 | 8 | 0.0000372201 |
| Vitis vinifera | chr16 | 4 | CH_vvi_200 | 3 | 4 | 0.00000416478 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |